Variant report

Variant	rs2891803
Chromosome Location	chr8:124844477-124844478
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10956150	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs12545556	1.00[CHB][hapmap]
rs12550449	1.00[CHB][hapmap]
rs1431667	0.87[EUR][1000 genomes]
rs1560513	1.00[EUR][1000 genomes]
rs17352760	1.00[CHB][hapmap]
rs1978680	1.00[CHB][hapmap]
rs1978681	1.00[CHB][hapmap]
rs1991696	0.87[EUR][1000 genomes]
rs1991697	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2116354	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs2116355	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs2116356	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2163530	0.87[EUR][1000 genomes]
rs2163531	1.00[EUR][1000 genomes]
rs2163532	1.00[EUR][1000 genomes]
rs4870865	1.00[CHB][hapmap]
rs6470188	0.87[EUR][1000 genomes]
rs7387172	1.00[CHB][hapmap]
rs7825091	1.00[CHB][hapmap]
rs7825404	1.00[CHB][hapmap]
rs7826622	0.87[EUR][1000 genomes]
rs7826644	0.87[EUR][1000 genomes]
rs7836620	1.00[CHB][hapmap];0.86[EUR][1000 genomes]
rs9792209	1.00[CEU][hapmap];1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831451	chr8:124710946-124885148	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124829400-124845000	Weak transcription	NHLF	lung
2	chr8:124836400-124850000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:124843800-124845200	Enhancers	Ovary	ovary
4	chr8:124844000-124846200	Enhancers	Fetal Lung	lung
5	chr8:124844400-124845600	Enhancers	Fetal Stomach	stomach
6	chr8:124844400-124846200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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