The 2.0 version of rSNPBase

Variant report

Variant rs2897054
Chromosome Location chr1:224447975-224447976
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224401800-224475400 Weak transcription Esophagus oesophagus
2 chr1:224411600-224454400 Weak transcription Psoas Muscle Psoas
3 chr1:224412400-224473600 Weak transcription HepG2 liver
4 chr1:224416000-224465600 Weak transcription Small Intestine intestine
5 chr1:224424600-224451600 Weak transcription Aorta Aorta
6 chr1:224424600-224479600 Weak transcription Pancreas Pancrea
7 chr1:224424800-224454200 Weak transcription HSMM muscle
8 chr1:224425600-224470000 Weak transcription NHDF-Ad bronchial
9 chr1:224431200-224490400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:224433400-224516200 Weak transcription Fetal Heart heart
11 chr1:224434400-224449400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:224434400-224474800 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:224434400-224474800 Weak transcription Fetal Brain Male brain
14 chr1:224436800-224449000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:224436800-224451000 Weak transcription HMEC breast
16 chr1:224436800-224452000 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:224436800-224454400 Weak transcription NHEK skin
18 chr1:224436800-224473600 Weak transcription Gastric stomach
19 chr1:224437000-224449000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:224437000-224449000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:224437000-224449000 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr1:224437000-224449000 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:224437000-224450400 Weak transcription Primary B cells from peripheral blood blood
24 chr1:224437000-224453400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:224437000-224454000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr1:224437000-224454200 Weak transcription Brain Cingulate Gyrus brain
27 chr1:224437000-224454200 Weak transcription Colon Smooth Muscle Colon
28 chr1:224437000-224454200 Weak transcription NHLF lung
29 chr1:224437000-224475200 Weak transcription Rectal Smooth Muscle rectum
30 chr1:224437000-224476600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:224437000-224479600 Weak transcription Right Ventricle heart
32 chr1:224437200-224450200 Weak transcription A549 lung
33 chr1:224437200-224450400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:224437200-224453400 Weak transcription Duodenum Mucosa Duodenum
35 chr1:224437200-224453800 Weak transcription GM12878-XiMat blood
36 chr1:224437200-224454000 Weak transcription Primary hematopoietic stem cells blood
37 chr1:224437600-224450600 Weak transcription Primary B cells from cord blood blood
38 chr1:224437600-224453400 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:224437600-224454000 Weak transcription Brain Anterior Caudate brain
40 chr1:224437600-224454000 Weak transcription Ovary ovary
41 chr1:224437600-224474800 Weak transcription Colonic Mucosa Colon
42 chr1:224437800-224450200 Weak transcription Fetal Brain Female brain
43 chr1:224437800-224451800 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr1:224437800-224453400 Weak transcription Primary monocytes fromperipheralblood blood
45 chr1:224437800-224453400 Weak transcription Fetal Lung lung
46 chr1:224437800-224453400 Weak transcription Left Ventricle heart
47 chr1:224437800-224454200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr1:224437800-224454200 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr1:224437800-224454200 Weak transcription Dnd41 blood
50 chr1:224437800-224462000 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015