Variant report

No.	Distal block	Cell Line	Cell type
1	chr12:123143891..123145970-chr12:123233018..123234630,2	MCF-7	breast:
2	chr12:123143377..123146138-chr12:123164475..123166669,2	MCF-7	breast:
3	chr12:123143945..123146058-chr12:123236061..123238623,2	K562	blood:

Variant related genes	Relation type
ENSG00000139726	Chromatin interaction
ENSG00000256044	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10847335	0.89[ASN][1000 genomes]
rs11059097	0.88[ASN][1000 genomes]
rs11059237	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11059257	0.89[ASN][1000 genomes]
rs11059258	0.87[ASN][1000 genomes]
rs11614147	0.88[ASN][1000 genomes]
rs11614277	0.88[ASN][1000 genomes]
rs12821949	0.89[ASN][1000 genomes]
rs2245199	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34357107	0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs35157148	0.90[ASN][1000 genomes]
rs35297311	0.90[ASN][1000 genomes]
rs59355577	0.87[ASN][1000 genomes]
rs612465	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs645348	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6489179	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7134265	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs73224116	0.90[ASN][1000 genomes]
rs73224188	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7397194	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7398147	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7952940	1.00[CHB][hapmap]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:123128200-123147600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr12:123135800-123152800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr12:123136600-123154200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr12:123140800-123153800	Weak transcription	A549	lung
5	chr12:123143800-123144600	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr12:123143800-123144600	Enhancers	Primary hematopoietic stem cells	blood
7	chr12:123143800-123144600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr12:123144000-123144600	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr12:123144000-123144600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
10	chr12:123144000-123144600	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr12:123144200-123144600	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr12:123144200-123144800	Enhancers	HepG2	liver
13	chr12:123144400-123145000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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