Variant report

Variant	rs7134265
Chromosome Location	chr12:123130591-123130592
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:123130027..123132200-chr12:123236586..123238656,2	K562	blood:
2	chr12:123130027..123133607-chr12:123236586..123238656,5	K562	blood:

Variant related genes	Relation type
ENSG00000139726	Chromatin interaction

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10847335	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11059097	0.97[ASN][1000 genomes]
rs11059100	0.93[EUR][1000 genomes]
rs11059237	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11059257	0.98[ASN][1000 genomes]
rs11059258	0.96[ASN][1000 genomes]
rs11614147	0.96[ASN][1000 genomes]
rs11614277	0.97[ASN][1000 genomes]
rs12821949	0.98[ASN][1000 genomes]
rs2245199	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2936731	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34357107	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35157148	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35297311	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59355577	0.94[ASN][1000 genomes]
rs612465	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61955000	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs645348	0.90[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6489179	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73224116	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73224188	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7397194	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7398147	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054458	chr12:123045662-123133545	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:123077400-123137600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:123101600-123131000	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr12:123108000-123131400	Weak transcription	NHLF	lung
4	chr12:123111600-123136200	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr12:123112200-123130600	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr12:123112200-123131200	Weak transcription	Osteobl	bone
7	chr12:123112400-123131000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr12:123115000-123131400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr12:123120200-123131000	Weak transcription	GM12878-XiMat	blood
10	chr12:123120200-123140800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr12:123120400-123131000	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr12:123120600-123131200	Weak transcription	A549	lung
13	chr12:123128200-123147600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr12:123128400-123131200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr12:123128400-123131200	Weak transcription	NHDF-Ad	bronchial
16	chr12:123128600-123131000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr12:123128600-123133400	Weak transcription	HepG2	liver
18	chr12:123128800-123131000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr12:123128800-123131200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr12:123128800-123136200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr12:123129000-123130600	Weak transcription	Primary hematopoietic stem cells	blood
22	chr12:123129000-123130600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr12:123129000-123131000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr12:123129800-123130600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr12:123129800-123131400	Weak transcription	K562	blood
26	chr12:123129800-123131600	Weak transcription	Rectal Mucosa Donor 29	rectum
27	chr12:123130000-123131000	Weak transcription	Primary neutrophils fromperipheralblood	blood
28	chr12:123130000-123135400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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