Variant report

Variant	rs2942076
Chromosome Location	chr12:121794748-121794749
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10774591	0.80[GIH][hapmap]
rs11065522	0.84[CHB][hapmap]
rs11065527	0.82[ASN][1000 genomes]
rs1169963	1.00[CEU][hapmap];0.94[GIH][hapmap];0.90[TSI][hapmap];0.89[EUR][1000 genomes]
rs1169964	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12303740	0.88[ASN][1000 genomes]
rs1617736	1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2089886	0.80[GIH][hapmap]
rs2668261	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2668262	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs2911705	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2942069	0.93[ASN][1000 genomes]
rs2950425	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2950426	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4980993	0.80[GIH][hapmap]
rs6489806	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7398507	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121791000-121795800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr12:121791200-121795600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr12:121791200-121795800	Weak transcription	Liver	Liver
4	chr12:121791200-121795800	Weak transcription	Fetal Intestine Small	intestine
5	chr12:121791200-121796000	Weak transcription	A549	lung
6	chr12:121792200-121796400	Enhancers	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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