The 2.0 version of rSNPBase

Variant report

Variant rs2943661
Chromosome Location chr1:85034370-85034371
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84991000-85038200 Weak transcription Thymus Thymus
2 chr1:84992400-85038800 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr1:84998600-85038800 Weak transcription Right Ventricle heart
4 chr1:85001400-85036400 Weak transcription NH-A brain
5 chr1:85002000-85038400 Weak transcription Aorta Aorta
6 chr1:85004000-85036400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:85005200-85035000 Weak transcription Pancreas Pancrea
8 chr1:85006200-85034600 Weak transcription Ovary ovary
9 chr1:85006200-85034800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:85006400-85034400 Weak transcription Colon Smooth Muscle Colon
11 chr1:85006600-85038600 Weak transcription Stomach Smooth Muscle stomach
12 chr1:85007200-85038600 Weak transcription Rectal Smooth Muscle rectum
13 chr1:85008800-85039000 Weak transcription Fetal Brain Male brain
14 chr1:85009400-85037000 Weak transcription HUVEC blood vessel
15 chr1:85014800-85039600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:85016600-85036400 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr1:85017400-85036400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:85017400-85039600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:85019200-85038400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:85022000-85038800 Weak transcription Placenta Amnion Placenta Amnion
21 chr1:85022400-85034400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:85023400-85034600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:85023400-85036400 Strong transcription Liver Liver
24 chr1:85024000-85035000 Weak transcription Fetal Muscle Trunk muscle
25 chr1:85024000-85036200 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr1:85024600-85036400 Strong transcription Primary monocytes fromperipheralblood blood
27 chr1:85024800-85038800 Weak transcription Brain Angular Gyrus brain
28 chr1:85025000-85036400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:85025400-85037000 Weak transcription Small Intestine intestine
30 chr1:85025600-85038800 Weak transcription HSMMtube muscle
31 chr1:85025800-85038800 Weak transcription Brain Substantia Nigra brain
32 chr1:85025800-85038800 Weak transcription Fetal Heart heart
33 chr1:85026200-85038800 Weak transcription Brain Cingulate Gyrus brain
34 chr1:85026800-85036200 Strong transcription Primary hematopoietic stem cells blood
35 chr1:85027000-85035000 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr1:85027200-85035000 Weak transcription Spleen Spleen
37 chr1:85027200-85037000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:85027200-85038600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr1:85027400-85035000 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:85027400-85036000 Weak transcription Muscle Satellite Cultured Cells --
41 chr1:85027400-85037600 Weak transcription HepG2 liver
42 chr1:85027800-85038600 Weak transcription Fetal Kidney kidney
43 chr1:85028000-85038600 Weak transcription Fetal Lung lung
44 chr1:85028200-85037000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr1:85028200-85038800 Weak transcription Brain Hippocampus Middle brain
46 chr1:85028200-85038800 Weak transcription HSMM muscle
47 chr1:85028400-85036400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr1:85028800-85036200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr1:85028800-85039600 Weak transcription Gastric stomach
50 chr1:85029000-85037400 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015