Variant report
| Variant | rs297505 |
|---|---|
| Chromosome Location | chr11:121267485-121267486 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:27)
| rs_ID | r2[population] |
|---|---|
| rs10790445 | 0.85[CHB][hapmap] |
| rs10892748 | 0.93[ASN][1000 genomes] |
| rs11218278 | 0.95[ASN][1000 genomes] |
| rs11601732 | 0.93[ASN][1000 genomes] |
| rs11601739 | 0.93[ASN][1000 genomes] |
| rs12277757 | 0.92[ASN][1000 genomes] |
| rs12294794 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes] |
| rs12295061 | 0.88[ASN][1000 genomes] |
| rs12295762 | 0.81[ASN][1000 genomes] |
| rs12808317 | 0.85[AMR][1000 genomes] |
| rs17125207 | 0.92[ASN][1000 genomes] |
| rs2370386 | 0.93[ASN][1000 genomes] |
| rs297501 | 0.82[AMR][1000 genomes];0.97[ASN][1000 genomes] |
| rs34801051 | 0.95[ASN][1000 genomes] |
| rs35391305 | 0.81[ASN][1000 genomes] |
| rs4936624 | 0.85[CHB][hapmap] |
| rs4936625 | 0.85[CHB][hapmap] |
| rs684490 | 0.89[ASN][1000 genomes] |
| rs7101565 | 0.93[ASN][1000 genomes] |
| rs7112762 | 0.93[ASN][1000 genomes] |
| rs7115574 | 0.90[ASN][1000 genomes] |
| rs7115832 | 0.93[ASN][1000 genomes] |
| rs7126261 | 0.93[ASN][1000 genomes] |
| rs73594788 | 0.93[ASN][1000 genomes] |
| rs73596707 | 0.97[ASN][1000 genomes] |
| rs7937444 | 0.92[ASN][1000 genomes] |
| rs9651698 | 0.93[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:121261000-121277000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
