Variant report

Variant rs3010562
Chromosome Location chr6:167765251-167765252
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:167763600-167765400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
2 chr6:167763600-167765400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr6:167763800-167765400 Flanking Active TSS Primary B cells from cord blood blood
4 chr6:167763800-167765400 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
5 chr6:167764000-167765400 Active TSS Fetal Brain Female brain
6 chr6:167764000-167765400 Enhancers Fetal Heart heart
7 chr6:167764200-167765600 Active TSS Fetal Kidney kidney
8 chr6:167764600-167765400 Bivalent Enhancer Placenta Placenta
9 chr6:167764600-167765600 Active TSS Primary T cells from cord blood blood
10 chr6:167764800-167765400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:167764800-167765400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr6:167764800-167765400 Active TSS GM12878-XiMat blood
13 chr6:167765000-167765400 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
14 chr6:167765000-167765400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
15 chr6:167765000-167765400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
16 chr6:167765000-167765400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
17 chr6:167765000-167765400 Enhancers Primary mononuclear cells fromperipheralblood Blood
18 chr6:167765000-167765400 Enhancers Brain Inferior Temporal Lobe brain
19 chr6:167765000-167765400 Enhancers Colon Smooth Muscle Colon
20 chr6:167765000-167765400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
21 chr6:167765000-167765400 Flanking Active TSS Thymus Thymus
22 chr6:167765000-167765400 Bivalent Enhancer Osteobl bone
23 chr6:167765000-167765600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
24 chr6:167765200-167765400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr6:167765200-167765400 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
26 chr6:167765200-167765400 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
27 chr6:167765200-167765400 Enhancers Primary hematopoietic stem cells blood
28 chr6:167765200-167765400 Enhancers Primary T helper cells fromperipheralblood blood
29 chr6:167765200-167765400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
30 chr6:167765200-167765400 Enhancers Primary Natural Killer cells fromperipheralblood blood
31 chr6:167765200-167765400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr6:167765200-167765400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:167765200-167765400 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
34 chr6:167765200-167765400 Enhancers Liver Liver
35 chr6:167765200-167765400 Bivalent Enhancer Brain Hippocampus Middle brain
36 chr6:167765200-167765400 Enhancers Duodenum Mucosa Duodenum
37 chr6:167765200-167765400 Enhancers Fetal Brain Male brain
38 chr6:167765200-167765400 Flanking Bivalent TSS/Enh Fetal Lung lung
39 chr6:167765200-167765400 Bivalent Enhancer Fetal Muscle Leg muscle
40 chr6:167765200-167765400 Enhancers HepG2 liver
41 chr6:167765200-167765400 Enhancers NH-A brain
42 chr6:167765200-167765600 Bivalent Enhancer Primary T cells fromperipheralblood blood
43 chr6:167765200-167765600 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr6:167765200-167765600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
45 chr6:167765200-167765600 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr6:167765200-167765600 Enhancers Primary T helper cells PMA-I stimulated --
47 chr6:167765200-167765600 Enhancers Fetal Intestine Small intestine
48 chr6:167765200-167765600 Enhancers Fetal Thymus thymus
49 chr6:167765200-167765600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
50 chr6:167765200-167765800 Weak transcription Psoas Muscle Psoas

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