The 2.0 version of rSNPBase

Variant report

Variant rs3020118
Chromosome Location chr8:117871747-117871748
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:117852400-117877000 Weak transcription Fetal Intestine Small intestine
2 chr8:117853000-117881400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr8:117854800-117875000 Strong transcription Dnd41 blood
4 chr8:117855400-117872800 Strong transcription Stomach Smooth Muscle stomach
5 chr8:117856000-117872800 Strong transcription Fetal Intestine Large intestine
6 chr8:117856000-117873000 Strong transcription Fetal Adrenal Gland Adrenal Gland
7 chr8:117856000-117874000 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr8:117856200-117872000 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr8:117856200-117873800 Strong transcription Fetal Muscle Trunk muscle
10 chr8:117856200-117877000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr8:117856400-117873000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr8:117856400-117873000 Strong transcription Liver Liver
13 chr8:117856400-117875200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr8:117856400-117878400 Strong transcription Primary monocytes fromperipheralblood blood
15 chr8:117856400-117879000 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr8:117856400-117882000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr8:117856600-117875400 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr8:117856600-117875800 Strong transcription iPS-18 Cell Line embryonic stem cell
19 chr8:117856800-117874200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr8:117856800-117875000 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr8:117856800-117877600 Strong transcription HSMM muscle
22 chr8:117856800-117878800 Strong transcription Fetal Thymus thymus
23 chr8:117857000-117879200 Strong transcription Hela-S3 cervix
24 chr8:117857200-117875800 Strong transcription HUVEC blood vessel
25 chr8:117857200-117878000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr8:117857400-117872800 Strong transcription Fetal Muscle Leg muscle
27 chr8:117857400-117875200 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr8:117857400-117877600 Strong transcription Primary T cells fromperipheralblood blood
29 chr8:117857600-117873400 Strong transcription Placenta Placenta
30 chr8:117857600-117875200 Strong transcription A549 lung
31 chr8:117857600-117878400 Strong transcription Duodenum Mucosa Duodenum
32 chr8:117857800-117875600 Strong transcription HMEC breast
33 chr8:117858000-117875200 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr8:117858000-117879000 Strong transcription Primary B cells from peripheral blood blood
35 chr8:117858200-117878400 Strong transcription Primary B cells from cord blood blood
36 chr8:117858400-117875000 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr8:117858400-117875800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr8:117858600-117873400 Strong transcription Fetal Lung lung
39 chr8:117858600-117873400 Strong transcription HepG2 liver
40 chr8:117858600-117874200 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr8:117858600-117875400 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr8:117858600-117875600 Strong transcription NHDF-Ad bronchial
43 chr8:117858600-117875600 Strong transcription NHEK skin
44 chr8:117858800-117872200 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr8:117858800-117873000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
46 chr8:117858800-117873000 Strong transcription Fetal Kidney kidney
47 chr8:117858800-117873200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr8:117858800-117873800 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr8:117858800-117874000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr8:117858800-117874400 Strong transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015