The 2.0 version of rSNPBase

Variant report

Variant rs3020128
Chromosome Location chr8:117880804-117880805
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:117853000-117881400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:117856400-117882000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr8:117859600-117883800 Weak transcription Stomach Mucosa stomach
4 chr8:117860400-117885800 Weak transcription Esophagus oesophagus
5 chr8:117864400-117882400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr8:117864400-117885800 Weak transcription Gastric stomach
7 chr8:117864800-117884000 Weak transcription Right Ventricle heart
8 chr8:117865200-117882400 Weak transcription Lung lung
9 chr8:117865200-117885800 Weak transcription Pancreas Pancrea
10 chr8:117865600-117881600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr8:117865600-117885800 Weak transcription Spleen Spleen
12 chr8:117867000-117885200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr8:117867000-117885600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr8:117868600-117881000 Weak transcription Fetal Brain Male brain
15 chr8:117870000-117884400 Weak transcription Colonic Mucosa Colon
16 chr8:117870200-117884800 Weak transcription H9 Cell Line embryonic stem cell
17 chr8:117872600-117884400 Weak transcription Placenta Amnion Placenta Amnion
18 chr8:117873000-117882600 Weak transcription Fetal Kidney kidney
19 chr8:117873800-117883000 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr8:117876000-117881400 Weak transcription NHLF lung
21 chr8:117876000-117882400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr8:117876000-117884600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr8:117876200-117881000 Weak transcription Thymus Thymus
24 chr8:117876200-117881400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr8:117876200-117881400 Weak transcription Left Ventricle heart
26 chr8:117876200-117881600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr8:117876200-117882800 Weak transcription NH-A brain
28 chr8:117876200-117883200 Weak transcription Fetal Intestine Large intestine
29 chr8:117877200-117884000 Transcr. at gene 5' and 3' Dnd41 blood
30 chr8:117877400-117881000 Weak transcription Fetal Muscle Leg muscle
31 chr8:117877400-117881400 Weak transcription Fetal Muscle Trunk muscle
32 chr8:117877400-117885000 Enhancers Fetal Heart heart
33 chr8:117877600-117881000 Weak transcription Primary T cells fromperipheralblood blood
34 chr8:117877600-117882200 Weak transcription Primary hematopoietic stem cells blood
35 chr8:117877800-117881400 Weak transcription HMEC breast
36 chr8:117877800-117881400 Weak transcription NHEK skin
37 chr8:117877800-117884400 Weak transcription Fetal Intestine Small intestine
38 chr8:117877800-117884600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr8:117878000-117881200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr8:117878200-117881400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr8:117878200-117881600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr8:117878200-117882200 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr8:117878200-117884400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr8:117878400-117881400 Weak transcription K562 blood
45 chr8:117878400-117881600 Weak transcription Duodenum Mucosa Duodenum
46 chr8:117878400-117882200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr8:117878400-117882400 Weak transcription Placenta Placenta
48 chr8:117878400-117882800 Weak transcription Primary monocytes fromperipheralblood blood
49 chr8:117878400-117884200 Weak transcription Fetal Stomach stomach
50 chr8:117878400-117884600 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015