The 2.0 version of rSNPBase

Variant report

Variant rs3020126
Chromosome Location chr8:117878278-117878279
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:117853000-117881400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:117856400-117878400 Strong transcription Primary monocytes fromperipheralblood blood
3 chr8:117856400-117879000 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr8:117856400-117882000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr8:117856800-117878800 Strong transcription Fetal Thymus thymus
6 chr8:117857000-117879200 Strong transcription Hela-S3 cervix
7 chr8:117857600-117878400 Strong transcription Duodenum Mucosa Duodenum
8 chr8:117858000-117879000 Strong transcription Primary B cells from peripheral blood blood
9 chr8:117858200-117878400 Strong transcription Primary B cells from cord blood blood
10 chr8:117859600-117883800 Weak transcription Stomach Mucosa stomach
11 chr8:117860400-117885800 Weak transcription Esophagus oesophagus
12 chr8:117864400-117882400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr8:117864400-117885800 Weak transcription Gastric stomach
14 chr8:117864800-117878400 Weak transcription Aorta Aorta
15 chr8:117864800-117884000 Weak transcription Right Ventricle heart
16 chr8:117865200-117882400 Weak transcription Lung lung
17 chr8:117865200-117885800 Weak transcription Pancreas Pancrea
18 chr8:117865600-117881600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr8:117865600-117885800 Weak transcription Spleen Spleen
20 chr8:117867000-117885200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr8:117867000-117885600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr8:117868600-117881000 Weak transcription Fetal Brain Male brain
23 chr8:117869800-117878800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr8:117870000-117884400 Weak transcription Colonic Mucosa Colon
25 chr8:117870200-117884800 Weak transcription H9 Cell Line embryonic stem cell
26 chr8:117872200-117878400 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr8:117872600-117884400 Weak transcription Placenta Amnion Placenta Amnion
28 chr8:117873000-117879400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr8:117873000-117882600 Weak transcription Fetal Kidney kidney
30 chr8:117873800-117878600 Weak transcription Brain Germinal Matrix brain
31 chr8:117873800-117883000 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr8:117875000-117879000 Genic enhancers Primary T helper cells PMA-I stimulated --
33 chr8:117875200-117878600 Genic enhancers HUES48 Cell Line embryonic stem cell
34 chr8:117875200-117879000 Genic enhancers Primary T helper cells fromperipheralblood blood
35 chr8:117875200-117880400 Enhancers Pancreatic Islets Pancreatic Islet
36 chr8:117876000-117878400 Weak transcription Ovary ovary
37 chr8:117876000-117878800 Weak transcription Osteobl bone
38 chr8:117876000-117880200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr8:117876000-117881400 Weak transcription NHLF lung
40 chr8:117876000-117882400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr8:117876000-117884600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr8:117876200-117879000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr8:117876200-117879400 Weak transcription Fetal Brain Female brain
44 chr8:117876200-117881000 Weak transcription Thymus Thymus
45 chr8:117876200-117881400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr8:117876200-117881400 Weak transcription Left Ventricle heart
47 chr8:117876200-117881600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr8:117876200-117882800 Weak transcription NH-A brain
49 chr8:117876200-117883200 Weak transcription Fetal Intestine Large intestine
50 chr8:117876800-117878800 Genic enhancers HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015