Variant report

Variant rs3108564
Chromosome Location chr19:37188703-37188704
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37179400-37188800 ZNF genes & repeats Brain Germinal Matrix brain
2 chr19:37179400-37194800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:37179400-37199200 Weak transcription Fetal Heart heart
4 chr19:37179600-37194400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr19:37179800-37188800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr19:37179800-37188800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
7 chr19:37179800-37188800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr19:37179800-37188800 ZNF genes & repeats Liver Liver
9 chr19:37179800-37188800 ZNF genes & repeats Fetal Brain Female brain
10 chr19:37179800-37189000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
11 chr19:37179800-37189000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr19:37179800-37189200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr19:37180000-37189200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr19:37180200-37188800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
15 chr19:37180200-37189000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr19:37180400-37188800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr19:37180400-37188800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
18 chr19:37180600-37188800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr19:37181600-37188800 ZNF genes & repeats Adipose Nuclei Adipose
20 chr19:37181600-37188800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
21 chr19:37181800-37188800 ZNF genes & repeats Primary hematopoietic stem cells blood
22 chr19:37183600-37188800 Strong transcription Skeletal Muscle Male skeletal muscle
23 chr19:37183600-37203200 Weak transcription K562 blood
24 chr19:37183800-37189000 ZNF genes & repeats Fetal Intestine Large intestine
25 chr19:37184000-37194600 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr19:37184200-37188800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr19:37184400-37194600 Weak transcription H9 Cell Line embryonic stem cell
28 chr19:37184400-37199000 Weak transcription Placenta Amnion Placenta Amnion
29 chr19:37185000-37188800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
30 chr19:37185000-37189200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
31 chr19:37185200-37188800 ZNF genes & repeats Primary T cells from cord blood blood
32 chr19:37185200-37188800 ZNF genes & repeats A549 lung
33 chr19:37185800-37188800 ZNF genes & repeats Fetal Lung lung
34 chr19:37186000-37188800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
35 chr19:37186000-37190000 Weak transcription Hela-S3 cervix
36 chr19:37186000-37194600 Weak transcription Muscle Satellite Cultured Cells --
37 chr19:37186200-37189400 Weak transcription Fetal Thymus thymus
38 chr19:37186400-37188800 Strong transcription Primary T helper naive cells fromperipheralblood blood
39 chr19:37186400-37188800 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr19:37186400-37189000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr19:37186400-37194400 Weak transcription Thymus Thymus
42 chr19:37186600-37194400 Weak transcription Fetal Stomach stomach
43 chr19:37186600-37195400 Weak transcription Right Ventricle heart
44 chr19:37186800-37188800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr19:37187000-37188800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr19:37187000-37188800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
47 chr19:37187000-37188800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
48 chr19:37187000-37188800 ZNF genes & repeats Brain Inferior Temporal Lobe brain
49 chr19:37187000-37188800 ZNF genes & repeats Duodenum Mucosa Duodenum
50 chr19:37187200-37188800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --

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