Variant report

Variant	rs3125832
Chromosome Location	chr1:211400180-211400181
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10863883	0.80[ASN][1000 genomes]
rs11811405	0.80[ASN][1000 genomes]
rs12071464	0.80[ASN][1000 genomes]
rs12744021	0.80[ASN][1000 genomes]
rs2095752	0.81[ASN][1000 genomes]
rs2095753	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3111244	0.88[ASN][1000 genomes]
rs3111245	0.81[ASN][1000 genomes]
rs3111246	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3111258	0.80[ASN][1000 genomes]
rs3125831	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3125833	0.81[ASN][1000 genomes]
rs4131375	0.87[ASN][1000 genomes]
rs61850977	0.80[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211397800-211405200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr1:211399200-211400600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr1:211400000-211400200	Enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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