Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11746598	0.84[AMR][1000 genomes]
rs11746987	0.94[CEU][hapmap];0.89[GIH][hapmap];0.86[TSI][hapmap];0.83[EUR][1000 genomes]
rs13174932	0.89[EUR][1000 genomes]
rs1457131	0.82[EUR][1000 genomes]
rs191162	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs318022	0.81[EUR][1000 genomes]
rs318040	0.88[EUR][1000 genomes]
rs318042	0.94[CEU][hapmap];0.88[EUR][1000 genomes]
rs318043	0.87[EUR][1000 genomes]
rs318044	1.00[CEU][hapmap];0.94[YRI][hapmap];0.81[EUR][1000 genomes]
rs318045	1.00[CEU][hapmap];0.94[YRI][hapmap];0.81[EUR][1000 genomes]
rs318046	0.81[EUR][1000 genomes]
rs318047	0.81[EUR][1000 genomes]
rs318084	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs318086	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs318087	1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35350798	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3851439	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs3913721	0.81[EUR][1000 genomes]
rs4245981	0.81[EUR][1000 genomes]
rs4346812	1.00[CEU][hapmap];0.89[GIH][hapmap];0.81[MEX][hapmap];0.86[TSI][hapmap];0.81[EUR][1000 genomes]
rs4957155	1.00[CEU][hapmap];0.81[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs318081	NNT	cis	cerebellum	SCAN

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41452800-41494000	Weak transcription	Ovary	ovary
2	chr5:41455200-41461800	Weak transcription	Left Ventricle	heart
3	chr5:41456200-41466600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr5:41457600-41458400	Flanking Active TSS	Fetal Heart	heart
5	chr5:41457600-41460800	Enhancers	Pancreatic Islets	Pancreatic Islet

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