Variant report

Variant	rs3181035
Chromosome Location	chr12:68546396-68546397
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11177061	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11177062	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11177066	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11177067	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11177070	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11177074	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11514279	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11831576	0.83[ASN][1000 genomes]
rs12306852	0.83[ASN][1000 genomes]
rs12308338	0.83[ASN][1000 genomes]
rs12310687	0.83[ASN][1000 genomes]
rs12318069	0.83[ASN][1000 genomes]
rs12369308	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12370401	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12370402	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17104851	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2069728	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3181032	1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[ASN][1000 genomes]
rs57680423	0.83[ASN][1000 genomes]
rs60017528	0.83[ASN][1000 genomes]
rs60079212	0.83[ASN][1000 genomes]
rs6581791	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7296336	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7296352	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7301168	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7315177	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs74099921	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs74099930	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7956688	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7959900	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1847952	chr12:68544896-68693242	Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:68544000-68546400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr12:68545800-68551200	Weak transcription	Primary T cells fromperipheralblood	blood

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