The 2.0 version of rSNPBase

Variant report

Variant rs3181197
Chromosome Location chr9:117667771-117667772
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117657800-117669600 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr9:117658600-117669200 Weak transcription Fetal Stomach stomach
3 chr9:117661800-117669800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr9:117662200-117676200 Weak transcription Gastric stomach
5 chr9:117662800-117670600 Weak transcription Esophagus oesophagus
6 chr9:117663000-117668600 Weak transcription Placenta Placenta
7 chr9:117663000-117669200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr9:117663200-117669000 Strong transcription Primary B cells from cord blood blood
9 chr9:117663400-117672800 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr9:117663600-117668200 Strong transcription Primary hematopoietic stem cells short term culture blood
11 chr9:117663600-117669000 Genic enhancers Primary T helper cells fromperipheralblood blood
12 chr9:117663600-117672400 Strong transcription Primary monocytes fromperipheralblood blood
13 chr9:117664000-117670200 Weak transcription HSMMtube muscle
14 chr9:117664400-117667800 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr9:117664400-117668200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr9:117664400-117670200 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr9:117664600-117668600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr9:117664800-117669200 Strong transcription Thymus Thymus
19 chr9:117665400-117668600 Weak transcription HUVEC blood vessel
20 chr9:117665400-117670200 Weak transcription Osteobl bone
21 chr9:117665400-117670400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr9:117665600-117669200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr9:117665600-117669400 Weak transcription HSMM muscle
24 chr9:117665600-117671000 Weak transcription NHLF lung
25 chr9:117665800-117668800 Strong transcription Primary T cells from cord blood blood
26 chr9:117665800-117668800 Weak transcription HMEC breast
27 chr9:117665800-117669200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr9:117665800-117669200 Weak transcription Duodenum Mucosa Duodenum
29 chr9:117665800-117669200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr9:117665800-117669200 Weak transcription Small Intestine intestine
31 chr9:117665800-117669400 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr9:117665800-117669400 Weak transcription Hela-S3 cervix
33 chr9:117665800-117669400 Weak transcription NHEK skin
34 chr9:117665800-117669600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr9:117665800-117670400 Genic enhancers Primary T cells fromperipheralblood blood
36 chr9:117665800-117670400 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr9:117665800-117672800 Weak transcription Spleen Spleen
38 chr9:117666000-117668600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr9:117666000-117668600 Weak transcription Placenta Amnion Placenta Amnion
40 chr9:117666000-117668800 Genic enhancers Primary T helper cells PMA-I stimulated --
41 chr9:117666000-117669200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr9:117666000-117669400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr9:117666400-117669200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr9:117666600-117667800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr9:117666600-117668600 Strong transcription Primary T helper naive cells fromperipheralblood blood
46 chr9:117666600-117669200 Weak transcription Fetal Thymus thymus
47 chr9:117666600-117670400 Weak transcription Primary hematopoietic stem cells blood
48 chr9:117666600-117670400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr9:117667000-117667800 Enhancers NHDF-Ad bronchial
50 chr9:117667000-117668800 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015