Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11626130	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12147907	0.90[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12879844	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12881773	1.00[ASN][1000 genomes]
rs12896378	0.91[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12896555	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12897078	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1375574	1.00[ASN][1000 genomes]
rs17201769	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17796627	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35112032	0.91[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35927240	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59671854	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66792363	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs67123871	1.00[ASN][1000 genomes]
rs72685724	1.00[ASN][1000 genomes]
rs72687543	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72687586	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9671968	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs967282	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751288	chr14:84815330-85704047	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3401331	chr14:85332747-85716351	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv832846	chr14:85517736-85715650	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3381198	chr14:85690248-85709087	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	inside rSNPs	n/a
5	nsv902168	chr14:85693904-85716792	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85690800-85700400	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr14:85691200-85696600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr14:85695800-85700200	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr14:85695800-85707200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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