Variant report
Variant | rs72687543 |
---|---|
Chromosome Location | chr14:85681746-85681747 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11626130 | 1.00[ASN][1000 genomes] |
rs12147907 | 1.00[ASN][1000 genomes] |
rs12879844 | 1.00[ASN][1000 genomes] |
rs12881773 | 1.00[ASN][1000 genomes] |
rs12896378 | 1.00[ASN][1000 genomes] |
rs12896555 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs12897078 | 1.00[ASN][1000 genomes] |
rs1375574 | 1.00[ASN][1000 genomes] |
rs17201769 | 1.00[ASN][1000 genomes] |
rs17796627 | 1.00[ASN][1000 genomes] |
rs34003123 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs35112032 | 1.00[ASN][1000 genomes] |
rs35927240 | 1.00[ASN][1000 genomes] |
rs59671854 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs66792363 | 1.00[ASN][1000 genomes] |
rs67123871 | 1.00[ASN][1000 genomes] |
rs72685724 | 1.00[ASN][1000 genomes] |
rs72687586 | 1.00[ASN][1000 genomes] |
rs9671968 | 0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs967282 | 0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2751288 | chr14:84815330-85704047 | Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
2 | nsv1048026 | chr14:85330544-85686322 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
3 | esv3401331 | chr14:85332747-85716351 | Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
4 | nsv832846 | chr14:85517736-85715650 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:85681600-85688800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |