Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11626130	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12147907	1.00[ASN][1000 genomes]
rs12879844	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12881773	1.00[ASN][1000 genomes]
rs12896378	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12896555	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12897078	1.00[ASN][1000 genomes]
rs1375574	1.00[ASN][1000 genomes]
rs17201769	1.00[CHB][hapmap];0.88[YRI][hapmap];1.00[ASN][1000 genomes]
rs17796627	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs34003123	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35112032	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs35927240	1.00[ASN][1000 genomes]
rs59671854	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs66792363	1.00[ASN][1000 genomes]
rs67123871	1.00[ASN][1000 genomes]
rs72685724	1.00[ASN][1000 genomes]
rs72687543	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72687586	1.00[ASN][1000 genomes]
rs9671968	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751288	chr14:84815330-85704047	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3401331	chr14:85332747-85716351	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv832846	chr14:85517736-85715650	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85681600-85688800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr14:85684200-85690000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr14:85684600-85689800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr14:85686400-85688000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:85687200-85688600	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr14:85687200-85690800	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr14:85687800-85688000	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr14:85687800-85690800	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr14:85687800-85691000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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