Variant report
Variant | rs34198302 |
---|---|
Chromosome Location | chr19:23343963-23343964 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
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No data |
rs_ID | r2[population] |
---|---|
rs10237971 | 0.81[EUR][1000 genomes] |
rs1060383 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10949955 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10949959 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs10949961 | 0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10949962 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs10949963 | 0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10949964 | 0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs10949966 | 0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs11760504 | 0.83[EUR][1000 genomes] |
rs11762549 | 0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs11763475 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11764690 | 0.90[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11764811 | 0.83[EUR][1000 genomes] |
rs11767448 | 0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs11769801 | 0.82[EUR][1000 genomes] |
rs11771269 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs11771279 | 0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs11978852 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs12530729 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs12530733 | 0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs12533804 | 0.91[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs12535805 | 0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs12537116 | 0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12537120 | 0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12537219 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12538992 | 0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12665875 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12666841 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs12666885 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12669596 | 0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12670240 | 0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12671632 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs13222578 | 0.81[EUR][1000 genomes] |
rs13226629 | 0.84[EUR][1000 genomes] |
rs13229762 | 0.84[EUR][1000 genomes] |
rs13231853 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs13232826 | 0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs13234869 | 0.83[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs13239892 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs13243536 | 0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs13244300 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs13245077 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs13245081 | 0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1540833 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1830014 | 0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1852026 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1917393 | 0.83[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs2049440 | 0.86[ASN][1000 genomes] |
rs2091224 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs2103146 | 0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2103148 | 0.81[EUR][1000 genomes] |
rs28510371 | 0.81[EUR][1000 genomes] |
rs34079274 | 0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs34171289 | 0.83[EUR][1000 genomes] |
rs34346758 | 0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs34362307 | 0.83[EUR][1000 genomes] |
rs34438629 | 0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs35189858 | 0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs35281840 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs35578542 | 0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs35586133 | 0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs35679667 | 0.81[EUR][1000 genomes] |
rs35794351 | 0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs35924077 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs3807068 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs3807069 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs3823471 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs3982216 | 0.83[EUR][1000 genomes] |
rs4302728 | 0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs4451193 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs4499978 | 0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4717235 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4717236 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4717238 | 0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4718177 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs4718178 | 0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs4718187 | 0.83[EUR][1000 genomes] |
rs5001356 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs55778450 | 0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs56009162 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs56303509 | 0.83[EUR][1000 genomes] |
rs58134413 | 0.83[EUR][1000 genomes] |
rs62455989 | 0.82[EUR][1000 genomes] |
rs6460216 | 0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs67529730 | 0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6954275 | 0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6959094 | 0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6965753 | 0.83[EUR][1000 genomes] |
rs6968439 | 0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs71562951 | 0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs71562952 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs71562953 | 0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs73141327 | 0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs73141358 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7383888 | 0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7787674 | 0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7789394 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs7800787 | 0.83[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs7801355 | 0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs7803542 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7807855 | 0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs7811966 | 0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs9638216 | 0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs9770631 | 0.82[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv34470 | chr19:22922549-23659458 | ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 80 gene(s) | inside rSNPs | diseases |
2 | esv34907 | chr19:22922549-23683097 | Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 80 gene(s) | inside rSNPs | diseases |
3 | nsv9686 | chr19:22989454-23653750 | Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 76 gene(s) | inside rSNPs | diseases |
4 | nsv817826 | chr19:23000745-23620632 | Active TSS Strong transcription ZNF genes & repeats Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 75 gene(s) | inside rSNPs | diseases |
5 | esv3693269 | chr19:23000745-23652839 | Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 76 gene(s) | inside rSNPs | diseases |
6 | esv2758491 | chr19:23071299-23940467 | ZNF genes & repeats Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 87 gene(s) | inside rSNPs | diseases |
7 | nsv1065157 | chr19:23091826-23812323 | Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Enhancers Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 83 gene(s) | inside rSNPs | diseases |
8 | nsv543959 | chr19:23091826-23812323 | Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 83 gene(s) | inside rSNPs | diseases |
9 | esv3424935 | chr19:23111817-23495542 | Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 48 gene(s) | inside rSNPs | diseases |
10 | esv3504832 | chr19:23114495-23397124 | Active TSS Weak transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
11 | esv3504833 | chr19:23114495-23397124 | Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
12 | nsv932212 | chr19:23170413-23372286 | Enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 23 gene(s) | inside rSNPs | diseases |
13 | esv3413015 | chr19:23172466-23416111 | Strong transcription Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
14 | esv3429878 | chr19:23246650-23590744 | Strong transcription ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 52 gene(s) | inside rSNPs | diseases |
15 | esv3410568 | chr19:23246670-23590714 | Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 52 gene(s) | inside rSNPs | diseases |
16 | esv3433243 | chr19:23249108-23585814 | Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 44 gene(s) | inside rSNPs | diseases |
17 | esv3387823 | chr19:23265885-23590028 | ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 47 gene(s) | inside rSNPs | diseases |
18 | nsv1060295 | chr19:23276069-23382990 | Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
19 | nsv1061493 | chr19:23289066-23419445 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
20 | nsv911458 | chr19:23297503-23353024 | ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
21 | esv3321838 | chr19:23303462-23482478 | Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
22 | nsv911459 | chr19:23309942-23359695 | ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
23 | nsv458527 | chr19:23309942-23392478 | ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
24 | nsv579032 | chr19:23309942-23392478 | Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
25 | esv3487542 | chr19:23310521-23438770 | ZNF genes & repeats Strong transcription Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
26 | esv3487543 | chr19:23310521-23438770 | ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
27 | esv1835605 | chr19:23316947-23349969 | ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS | TF binding regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
28 | nsv911460 | chr19:23327714-23397282 | ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS | TF binding regionCpG islandlncRNA | 2 gene(s) | inside rSNPs | diseases |
29 | nsv911461 | chr19:23327714-23408129 | Strong transcription Weak transcription ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandlncRNA | 2 gene(s) | inside rSNPs | diseases |
30 | nsv911462 | chr19:23327714-23422195 | Strong transcription ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandlncRNA | 3 gene(s) | inside rSNPs | diseases |
31 | nsv911463 | chr19:23327714-23430436 | ZNF genes & repeats Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
32 | nsv833789 | chr19:23329463-23487797 | Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:23343200-23344000 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
2 | chr19:23343400-23344600 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |