Variant report

Variant	rs34199962
Chromosome Location	chr22:31384578-31384579
allele	-/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12166445	1.00[AMR][1000 genomes]
rs12168997	1.00[AMR][1000 genomes]
rs12169136	1.00[AMR][1000 genomes]
rs16989109	1.00[AMR][1000 genomes]
rs5997885	1.00[AMR][1000 genomes]
rs73881328	1.00[AMR][1000 genomes]
rs73881343	1.00[AMR][1000 genomes]
rs73881353	1.00[AMR][1000 genomes]
rs9619138	1.00[AMR][1000 genomes]
rs9619140	1.00[AMR][1000 genomes]
rs9621106	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv9896	chr22:31369204-31513933	Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31381000-31385200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr22:31384000-31384600	Enhancers	HSMMtube	muscle
3	chr22:31384400-31384600	Enhancers	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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