The 2.0 version of rSNPBase

Variant report

Variant rs34223306
Chromosome Location chr4:143481053-143481054
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:143471200-143481800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr4:143471400-143481800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr4:143472400-143481200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr4:143472600-143486800 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr4:143475600-143488000 Weak transcription Primary hematopoietic stem cells blood
6 chr4:143477800-143484400 Weak transcription HMEC breast
7 chr4:143477800-143487000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr4:143478000-143486600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr4:143478000-143486800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr4:143478200-143486000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr4:143478400-143482000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr4:143478800-143481400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr4:143478800-143482200 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr4:143478800-143483600 Weak transcription Fetal Thymus thymus
15 chr4:143478800-143488000 Weak transcription Fetal Intestine Large intestine
16 chr4:143479200-143481200 Weak transcription Primary T cells fromperipheralblood blood
17 chr4:143479200-143487600 Weak transcription Fetal Intestine Small intestine
18 chr4:143479200-143488400 Weak transcription Pancreas Pancrea
19 chr4:143479400-143481200 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr4:143479800-143482000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr4:143480000-143481200 Enhancers Primary T regulatory cells fromperipheralblood blood
22 chr4:143480000-143482200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr4:143480200-143481600 Enhancers Fetal Lung lung
24 chr4:143480200-143485000 Weak transcription HSMM muscle
25 chr4:143480200-143487000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr4:143480400-143481200 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr4:143480400-143481200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:143480400-143481200 Enhancers Primary T helper cells fromperipheralblood blood
29 chr4:143480400-143481200 Weak transcription NHLF lung
30 chr4:143480400-143481400 Weak transcription Osteobl bone
31 chr4:143480400-143482000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr4:143480400-143483400 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr4:143480400-143484800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr4:143480600-143481200 Enhancers Primary T helper cells PMA-I stimulated --
35 chr4:143480600-143482000 Enhancers Fetal Heart heart
36 chr4:143480600-143482200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
37 chr4:143480600-143487800 Weak transcription Placenta Amnion Placenta Amnion
38 chr4:143481000-143481200 Enhancers Fetal Kidney kidney
39 chr4:143481000-143481400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr4:143481000-143482000 Enhancers Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015