Variant report

Variant	rs34247884
Chromosome Location	chr1:211271029-211271030
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:211270496..211272930-chr1:211273186..211276127,2	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs12735839	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12750065	0.80[ASN][1000 genomes]
rs12755446	0.80[ASN][1000 genomes]
rs12760898	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17188839	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17188846	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17188881	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17267414	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17267421	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17267428	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17267442	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34403324	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35035396	0.86[EUR][1000 genomes]
rs35385507	0.80[ASN][1000 genomes]
rs35593738	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs35664000	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35714691	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35957403	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs36115666	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3762452	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3828159	0.87[ASN][1000 genomes]
rs4326688	0.80[ASN][1000 genomes]
rs4612687	0.86[EUR][1000 genomes]
rs59200985	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6662529	0.80[ASN][1000 genomes]
rs6679835	0.80[ASN][1000 genomes]
rs71638196	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs71638198	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs71638199	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7512567	0.80[ASN][1000 genomes]
rs7512644	0.80[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211256400-211285400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211256800-211276600	Weak transcription	Brain Angular Gyrus	brain
3	chr1:211256800-211277000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr1:211256800-211282400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr1:211263400-211273000	Weak transcription	HSMMtube	muscle
6	chr1:211264400-211277400	Weak transcription	Brain Anterior Caudate	brain
7	chr1:211265400-211277200	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr1:211266400-211280200	Weak transcription	Pancreas	Pancrea
9	chr1:211269000-211271800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr1:211269800-211278600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr1:211271000-211271400	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr1:211271000-211271800	Strong transcription	HSMM	muscle

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