Variant report

Variant	rs35957403
Chromosome Location	chr1:211250196-211250197
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs12735839	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12750065	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12755446	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12760898	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17188839	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17188846	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17188881	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17267414	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17267421	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17267428	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17267442	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34247884	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34403324	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35035396	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35385507	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35593738	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35664000	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35714691	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35829564	0.86[ASN][1000 genomes]
rs36005892	0.85[ASN][1000 genomes]
rs36115666	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3762452	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3828159	0.96[ASN][1000 genomes]
rs4326688	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4612687	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs59200985	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6662529	0.89[ASN][1000 genomes]
rs6679835	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs71638196	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs71638198	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71638199	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7512567	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7512644	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211242600-211256400	Weak transcription	A549	lung
2	chr1:211248400-211250400	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
3	chr1:211249400-211256000	Weak transcription	HSMMtube	muscle
4	chr1:211249400-211257800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr1:211249400-211261200	Weak transcription	Brain Hippocampus Middle	brain
6	chr1:211249400-211263600	Weak transcription	Brain Anterior Caudate	brain
7	chr1:211249800-211250200	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr1:211249800-211255400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr1:211249800-211255800	Weak transcription	Brain Angular Gyrus	brain
10	chr1:211249800-211256000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr1:211249800-211256000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr1:211249800-211256000	Weak transcription	Brain Cingulate Gyrus	brain
13	chr1:211249800-211257000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr1:211250000-211254800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr1:211250000-211255400	Weak transcription	HSMM	muscle
16	chr1:211250000-211271000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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