Variant report

Variant	rs34267888
Chromosome Location	chr6:55044902-55044903
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs13202991	0.86[EUR][1000 genomes]
rs13218015	0.86[EUR][1000 genomes]
rs34187954	0.86[EUR][1000 genomes]
rs34321112	0.86[EUR][1000 genomes]
rs34491203	0.86[EUR][1000 genomes]
rs34602564	0.86[EUR][1000 genomes]
rs34841798	0.86[EUR][1000 genomes]
rs34896294	0.86[EUR][1000 genomes]
rs34920015	0.86[EUR][1000 genomes]
rs34950463	0.86[EUR][1000 genomes]
rs35081106	0.86[EUR][1000 genomes]
rs35094736	0.86[EUR][1000 genomes]
rs35729004	0.86[EUR][1000 genomes]
rs36062413	0.86[EUR][1000 genomes]
rs36115210	0.86[EUR][1000 genomes]
rs4524608	0.86[EUR][1000 genomes]
rs71560885	0.86[EUR][1000 genomes]
rs71560895	0.86[EUR][1000 genomes]
rs71560900	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs71560901	1.00[EUR][1000 genomes]
rs7747706	0.86[EUR][1000 genomes]
rs7767204	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016461	chr6:55038131-55129663	Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:55043600-55048200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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