The 2.0 version of rSNPBase

Variant report

Variant rs34409900
Chromosome Location chr10:97025741-97025742
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:96998400-97030200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr10:97007000-97026400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr10:97009200-97028200 Weak transcription Fetal Muscle Trunk muscle
4 chr10:97016400-97026200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr10:97016800-97036000 Weak transcription Primary hematopoietic stem cells blood
6 chr10:97018800-97030000 Weak transcription Thymus Thymus
7 chr10:97019400-97026400 Genic enhancers Breast Myoepithelial Primary Cells Breast
8 chr10:97020000-97026600 Genic enhancers Fetal Intestine Large intestine
9 chr10:97020200-97026600 Genic enhancers Fetal Intestine Small intestine
10 chr10:97020200-97026600 Enhancers Right Atrium heart
11 chr10:97020400-97027000 Genic enhancers HepG2 liver
12 chr10:97021000-97026200 Weak transcription Colon Smooth Muscle Colon
13 chr10:97021000-97026600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr10:97021000-97034400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr10:97021200-97026000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr10:97021200-97026200 Weak transcription HUVEC blood vessel
17 chr10:97021200-97026600 Genic enhancers NHEK skin
18 chr10:97021400-97025800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr10:97021400-97026000 Weak transcription NH-A brain
20 chr10:97021400-97026200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr10:97021400-97026200 Weak transcription Rectal Smooth Muscle rectum
22 chr10:97021400-97036400 Weak transcription Stomach Smooth Muscle stomach
23 chr10:97021600-97027800 Weak transcription HSMM muscle
24 chr10:97022000-97027400 Genic enhancers Primary B cells from peripheral blood blood
25 chr10:97023000-97026400 Genic enhancers Placenta Placenta
26 chr10:97023000-97026800 Genic enhancers Sigmoid Colon Sigmoid Colon
27 chr10:97023200-97028200 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr10:97023200-97029200 Genic enhancers HMEC breast
29 chr10:97023200-97033000 Weak transcription Psoas Muscle Psoas
30 chr10:97023400-97028200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr10:97023600-97026400 Weak transcription Fetal Heart heart
32 chr10:97023800-97028800 Weak transcription Fetal Muscle Leg muscle
33 chr10:97024000-97026000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr10:97024000-97026400 Enhancers H9 Cell Line embryonic stem cell
35 chr10:97024000-97026400 Enhancers Esophagus oesophagus
36 chr10:97024200-97026000 Weak transcription Fetal Thymus thymus
37 chr10:97024200-97026000 Weak transcription NHLF lung
38 chr10:97024200-97026400 Enhancers Placenta Amnion Placenta Amnion
39 chr10:97024200-97029000 Enhancers Stomach Mucosa stomach
40 chr10:97024200-97033000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr10:97024400-97026000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr10:97024400-97026200 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr10:97024400-97026200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr10:97024400-97027400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr10:97024400-97028200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr10:97024400-97028200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr10:97024400-97028200 Weak transcription Gastric stomach
48 chr10:97024400-97035000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr10:97024600-97026200 Weak transcription Hela-S3 cervix
50 chr10:97024600-97026600 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015