Variant report

Variant	rs34475613
Chromosome Location	chr12:4882741-4882742
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs11063307	1.00[ASN][1000 genomes]
rs12809178	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12809919	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12816272	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12817218	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12821116	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12827952	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12831221	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16931649	1.00[ASN][1000 genomes]
rs17701871	1.00[ASN][1000 genomes]
rs2286579	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34205979	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34214125	1.00[ASN][1000 genomes]
rs34310347	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34337517	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34502100	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34765166	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34947765	1.00[ASN][1000 genomes]
rs34952740	1.00[ASN][1000 genomes]
rs35016874	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35288424	1.00[ASN][1000 genomes]
rs35342320	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35464779	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35562639	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35715089	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35878255	1.00[ASN][1000 genomes]
rs35899818	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35925396	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4766273	1.00[ASN][1000 genomes]
rs5007510	1.00[ASN][1000 genomes]
rs55760751	1.00[ASN][1000 genomes]
rs59096706	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59986414	1.00[ASN][1000 genomes]
rs66703365	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67871557	1.00[ASN][1000 genomes]
rs68144469	1.00[ASN][1000 genomes]
rs71459918	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73038876	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7306593	1.00[ASN][1000 genomes]
rs960763	1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:4869800-4884200	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr12:4873200-4889800	Weak transcription	Stomach Smooth Muscle	stomach
3	chr12:4873400-4889400	Weak transcription	Ovary	ovary
4	chr12:4877000-4885800	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr12:4878200-4885000	Weak transcription	Brain Cingulate Gyrus	brain
6	chr12:4880600-4884200	Weak transcription	Lung	lung
7	chr12:4880800-4884400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr12:4880800-4884800	Weak transcription	Brain Anterior Caudate	brain
9	chr12:4881000-4882800	Strong transcription	Fetal Brain Female	brain
10	chr12:4881400-4882800	Strong transcription	Brain Germinal Matrix	brain
11	chr12:4881600-4883000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr12:4882000-4885200	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr12:4882200-4893600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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