The 2.0 version of rSNPBase

Variant report

Variant rs34524468
Chromosome Location chr3:134048874-134048875
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:134035000-134058800 Weak transcription Liver Liver
2 chr3:134036600-134050600 Weak transcription Fetal Brain Female brain
3 chr3:134041200-134056600 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr3:134042000-134060800 Enhancers Placenta Placenta
5 chr3:134042200-134050600 Enhancers Placenta Amnion Placenta Amnion
6 chr3:134042200-134052400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr3:134042600-134054000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr3:134042600-134054400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr3:134042800-134057000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr3:134044000-134054400 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr3:134045000-134056400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr3:134045200-134049200 Weak transcription Fetal Intestine Small intestine
13 chr3:134045400-134050200 Weak transcription Gastric stomach
14 chr3:134045400-134052600 Weak transcription Duodenum Mucosa Duodenum
15 chr3:134046000-134052400 Weak transcription Brain Hippocampus Middle brain
16 chr3:134046400-134049400 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr3:134046400-134049600 Weak transcription Fetal Stomach stomach
18 chr3:134046400-134051800 Enhancers Adipose Nuclei Adipose
19 chr3:134046400-134052600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr3:134046600-134049000 Weak transcription Rectal Smooth Muscle rectum
21 chr3:134046600-134049200 Weak transcription Fetal Intestine Large intestine
22 chr3:134046600-134049400 Weak transcription Fetal Kidney kidney
23 chr3:134046600-134049600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr3:134046600-134049600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr3:134046600-134049800 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr3:134046600-134050200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr3:134046600-134050200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr3:134046600-134050200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr3:134046600-134050200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr3:134046600-134050400 Enhancers HUES6 Cell Line embryonic stem cell
31 chr3:134046600-134050400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr3:134046600-134050600 Enhancers HSMMtube muscle
33 chr3:134046600-134053000 Weak transcription Spleen Spleen
34 chr3:134046600-134053600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr3:134046800-134050800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr3:134047000-134049800 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr3:134047000-134049800 Weak transcription Right Atrium heart
38 chr3:134047000-134050400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr3:134047200-134049000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr3:134047200-134049400 Weak transcription Fetal Heart heart
41 chr3:134047200-134050200 Enhancers NHEK skin
42 chr3:134047200-134050400 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr3:134047400-134049000 Weak transcription H9 Cell Line embryonic stem cell
44 chr3:134047400-134049000 Weak transcription Lung lung
45 chr3:134047400-134049000 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr3:134047400-134049600 Weak transcription Colon Smooth Muscle Colon
47 chr3:134047400-134049800 Weak transcription H1 Cell Line embryonic stem cell
48 chr3:134047400-134049800 Weak transcription Fetal Lung lung
49 chr3:134047400-134049800 Weak transcription Fetal Muscle Trunk muscle
50 chr3:134047400-134049800 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015