The 2.0 version of rSNPBase

Variant report

Variant rs34563660
Chromosome Location chr11:17357471-17357472
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17299000-17357600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:17299000-17360600 Weak transcription Small Intestine intestine
3 chr11:17308200-17357600 Weak transcription HepG2 liver
4 chr11:17308200-17360800 Strong transcription Fetal Thymus thymus
5 chr11:17308200-17372600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr11:17308400-17361600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr11:17316000-17360000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr11:17316000-17361000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr11:17320800-17372400 Weak transcription GM12878-XiMat blood
10 chr11:17326400-17358000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr11:17330200-17358000 Weak transcription K562 blood
12 chr11:17331800-17362000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr11:17334000-17371000 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr11:17335600-17361000 Strong transcription Dnd41 blood
15 chr11:17335800-17357600 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr11:17336200-17372600 Weak transcription HUVEC blood vessel
17 chr11:17336400-17360800 Weak transcription HSMM muscle
18 chr11:17336800-17358400 Weak transcription Brain Germinal Matrix brain
19 chr11:17336800-17365000 Weak transcription NHEK skin
20 chr11:17350400-17365200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr11:17350800-17364800 Weak transcription NHLF lung
22 chr11:17351200-17358000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr11:17351200-17361400 Weak transcription Pancreas Pancrea
24 chr11:17352400-17365800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr11:17352600-17365400 Weak transcription HMEC breast
26 chr11:17354000-17358600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr11:17354000-17365200 Weak transcription Muscle Satellite Cultured Cells --
28 chr11:17354200-17357800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr11:17354200-17364800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr11:17354200-17369200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr11:17354400-17360400 Weak transcription Brain Anterior Caudate brain
32 chr11:17354400-17373000 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr11:17354600-17365600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr11:17354600-17372400 Weak transcription Liver Liver
35 chr11:17355000-17357600 Weak transcription Primary B cells from cord blood blood
36 chr11:17355200-17360400 Weak transcription Fetal Brain Female brain
37 chr11:17355200-17365400 Weak transcription NH-A brain
38 chr11:17355600-17358600 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr11:17355600-17364800 Weak transcription NHDF-Ad bronchial
40 chr11:17355800-17357800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr11:17355800-17357800 Weak transcription Duodenum Mucosa Duodenum
42 chr11:17356000-17360600 Weak transcription Fetal Muscle Leg muscle
43 chr11:17356000-17364800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr11:17356000-17365400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr11:17356000-17367600 Weak transcription Primary hematopoietic stem cells blood
46 chr11:17356000-17371000 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr11:17356000-17372200 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr11:17356000-17372400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr11:17356000-17372600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr11:17356000-17372600 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015