The 2.0 version of rSNPBase

Variant report

Variant rs34572599
Chromosome Location chr12:29309596-29309597
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:29303200-29309800 Weak transcription NHDF-Ad bronchial
2 chr12:29303400-29309800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr12:29303400-29311400 Weak transcription H9 Cell Line embryonic stem cell
4 chr12:29303400-29312200 Weak transcription Spleen Spleen
5 chr12:29303400-29316600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr12:29303400-29317000 Weak transcription Colonic Mucosa Colon
7 chr12:29303400-29317800 Weak transcription Fetal Kidney kidney
8 chr12:29303600-29313400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr12:29303800-29310200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr12:29304000-29312600 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr12:29306000-29312400 Weak transcription Duodenum Mucosa Duodenum
12 chr12:29306400-29310400 Weak transcription Right Atrium heart
13 chr12:29306400-29313000 Weak transcription Rectal Smooth Muscle rectum
14 chr12:29306400-29313200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr12:29306600-29310400 Enhancers Primary neutrophils fromperipheralblood blood
16 chr12:29306600-29310600 Weak transcription Adipose Nuclei Adipose
17 chr12:29306600-29312600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr12:29306600-29312600 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr12:29306600-29313000 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr12:29306600-29324600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr12:29306800-29310400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr12:29306800-29313200 Weak transcription Fetal Thymus thymus
23 chr12:29306800-29324400 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr12:29308400-29309600 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr12:29308400-29309600 Weak transcription NH-A brain
26 chr12:29308400-29310200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr12:29308400-29310200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr12:29308400-29310200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr12:29308400-29312600 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr12:29308400-29312600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr12:29308400-29312600 Weak transcription K562 blood
32 chr12:29308400-29313200 Weak transcription Brain Anterior Caudate brain
33 chr12:29308400-29317000 Weak transcription Fetal Intestine Small intestine
34 chr12:29308400-29324000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr12:29308400-29324400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr12:29308600-29310200 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr12:29308600-29310400 Weak transcription Placenta Placenta
38 chr12:29308600-29311200 Weak transcription GM12878-XiMat blood
39 chr12:29308600-29312600 Weak transcription Small Intestine intestine
40 chr12:29308800-29309800 Weak transcription Primary B cells from cord blood blood
41 chr12:29308800-29317200 Weak transcription Dnd41 blood
42 chr12:29309000-29310400 Enhancers Primary hematopoietic stem cells blood
43 chr12:29309200-29312600 Enhancers HUVEC blood vessel
44 chr12:29309400-29311400 Active TSS Brain Hippocampus Middle brain
45 chr12:29309400-29314400 Enhancers Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015