Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10181864	0.83[ASN][1000 genomes]
rs10191972	0.86[ASN][1000 genomes]
rs11893380	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12328907	1.00[ASN][1000 genomes]
rs12694250	0.86[ASN][1000 genomes]
rs13016387	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13019783	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13026360	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13420886	0.86[ASN][1000 genomes]
rs17413784	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2272024	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34658976	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35762488	0.86[ASN][1000 genomes]
rs4315465	0.86[EUR][1000 genomes]
rs4493186	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59853762	0.86[EUR][1000 genomes]
rs61257038	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6435654	0.81[ASN][1000 genomes]
rs6725181	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6732128	0.98[ASN][1000 genomes]
rs71422750	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754366	chr2:212470494-212541494	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
2	nsv460070	chr2:212492764-212541377	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
3	nsv584322	chr2:212492764-212541377	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212467400-212546800	Weak transcription	Aorta	Aorta
2	chr2:212514600-212527600	Weak transcription	Brain Hippocampus Middle	brain
3	chr2:212514800-212528800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:212520200-212527800	Weak transcription	Brain Anterior Caudate	brain
5	chr2:212520800-212522800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr2:212521200-212540400	Weak transcription	Fetal Heart	heart
7	chr2:212521400-212540800	Weak transcription	Fetal Kidney	kidney
8	chr2:212522400-212522800	Enhancers	HUVEC	blood vessel
9	chr2:212522600-212522800	Genic enhancers	Pancreas	Pancrea

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