Variant report

Variant	rs6732128
Chromosome Location	chr2:212528298-212528299
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10181864	0.85[ASN][1000 genomes]
rs10191972	0.88[ASN][1000 genomes]
rs11893380	0.88[ASN][1000 genomes]
rs12328907	0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12694250	0.88[ASN][1000 genomes]
rs13016387	0.85[ASN][1000 genomes]
rs13019783	0.88[ASN][1000 genomes]
rs13026360	0.88[ASN][1000 genomes]
rs13420886	0.88[ASN][1000 genomes]
rs13424871	0.91[EUR][1000 genomes]
rs17413784	0.90[ASN][1000 genomes]
rs2272024	0.88[ASN][1000 genomes]
rs34621071	0.98[ASN][1000 genomes]
rs34658976	0.88[ASN][1000 genomes]
rs35762488	0.88[ASN][1000 genomes]
rs4493186	0.85[ASN][1000 genomes]
rs61257038	0.88[ASN][1000 genomes]
rs6435654	0.83[ASN][1000 genomes]
rs6725181	0.83[ASN][1000 genomes]
rs71422749	0.80[AMR][1000 genomes]
rs71422750	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754366	chr2:212470494-212541494	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
2	nsv460070	chr2:212492764-212541377	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
3	nsv584322	chr2:212492764-212541377	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212467400-212546800	Weak transcription	Aorta	Aorta
2	chr2:212514800-212528800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr2:212521200-212540400	Weak transcription	Fetal Heart	heart
4	chr2:212521400-212540800	Weak transcription	Fetal Kidney	kidney
5	chr2:212522800-212537800	Weak transcription	Pancreas	Pancrea
6	chr2:212527200-212528800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr2:212527800-212529600	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr2:212528000-212529200	Enhancers	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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