The 2.0 version of rSNPBase

Variant report

Variant rs34623097
Chromosome Location chr5:148204609-148204610
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:148186400-148205400 Weak transcription Aorta Aorta
2 chr5:148189000-148204800 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr5:148189000-148205200 Weak transcription Psoas Muscle Psoas
4 chr5:148194600-148205200 Enhancers Primary monocytes fromperipheralblood blood
5 chr5:148194600-148205200 Enhancers Primary neutrophils fromperipheralblood blood
6 chr5:148195000-148205200 Weak transcription Brain Substantia Nigra brain
7 chr5:148195200-148205200 Weak transcription Brain Cingulate Gyrus brain
8 chr5:148195400-148205000 Weak transcription Colon Smooth Muscle Colon
9 chr5:148195400-148205200 Weak transcription Brain Anterior Caudate brain
10 chr5:148196600-148205200 Weak transcription Right Atrium heart
11 chr5:148197600-148204800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr5:148197600-148205400 Weak transcription Spleen Spleen
13 chr5:148198600-148205200 Weak transcription Brain Hippocampus Middle brain
14 chr5:148200200-148205200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr5:148202600-148204800 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr5:148203200-148205200 Weak transcription Fetal Stomach stomach
17 chr5:148203200-148206000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
18 chr5:148203400-148205000 Enhancers Primary B cells from cord blood blood
19 chr5:148203600-148205200 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr5:148203800-148204800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr5:148204200-148204800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr5:148204200-148205000 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr5:148204200-148205000 Enhancers Rectal Mucosa Donor 29 rectum
24 chr5:148204200-148205000 Enhancers Hela-S3 cervix
25 chr5:148204200-148205200 Enhancers Primary T cells fromperipheralblood blood
26 chr5:148204200-148205200 Enhancers Primary Natural Killer cells fromperipheralblood blood
27 chr5:148204200-148205200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr5:148204200-148205200 Enhancers Adipose Nuclei Adipose
29 chr5:148204200-148205200 Enhancers Duodenum Mucosa Duodenum
30 chr5:148204200-148205200 Enhancers Fetal Muscle Leg muscle
31 chr5:148204200-148205200 Enhancers NHDF-Ad bronchial
32 chr5:148204400-148204800 Weak transcription Primary B cells from peripheral blood blood
33 chr5:148204400-148205000 Enhancers Muscle Satellite Cultured Cells --
34 chr5:148204400-148205000 Enhancers Liver Liver
35 chr5:148204400-148205000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr5:148204400-148205000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr5:148204400-148205000 Enhancers HMEC breast
38 chr5:148204400-148205200 Enhancers Primary hematopoietic stem cells blood
39 chr5:148204400-148205200 Enhancers Fetal Lung lung
40 chr5:148204400-148205200 Enhancers NHLF lung
41 chr5:148204400-148205400 Weak transcription Gastric stomach
42 chr5:148204600-148205000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr5:148204600-148205000 Enhancers Fetal Heart heart
44 chr5:148204600-148205000 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015