Variant report

Variant	rs34745169
Chromosome Location	chr14:32706623-32706624
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 154 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:150)

rs_ID	r²[population]
rs10501373	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10750905	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10792187	0.85[ASN][1000 genomes]
rs10792188	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10792189	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10792203	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10896831	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10896846	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10896855	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11229621	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11229624	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11229647	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11229660	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11229665	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11229669	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11229675	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11229681	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11229685	0.91[AMR][1000 genomes]
rs12365539	0.90[AMR][1000 genomes]
rs12576002	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1893630	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1938700	0.90[AMR][1000 genomes]
rs1938706	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1938710	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1938712	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1938720	0.90[AMR][1000 genomes]
rs1938721	0.90[AMR][1000 genomes]
rs1938726	0.90[AMR][1000 genomes]
rs1938727	1.00[AMR][1000 genomes]
rs1943275	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1943286	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943287	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943288	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943289	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943290	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943291	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1943292	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943293	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943294	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943295	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943296	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943297	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943298	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1943300	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1943301	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1943302	0.93[ASN][1000 genomes]
rs1943306	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2156348	0.95[EUR][1000 genomes]
rs2156350	0.93[ASN][1000 genomes]
rs2156351	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2187269	0.89[ASN][1000 genomes]
rs2212844	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2212850	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2226794	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2497369	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2507835	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2849853	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2849854	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2856259	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3020908	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3020909	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4103678	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4554906	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs490828	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs492802	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs493580	1.00[ASN][1000 genomes]
rs493659	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4939234	0.94[ASN][1000 genomes]
rs4939236	0.93[ASN][1000 genomes]
rs4939237	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4939238	0.93[ASN][1000 genomes]
rs494174	0.90[AMR][1000 genomes]
rs496601	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs497348	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs498036	0.83[ASN][1000 genomes]
rs499891	0.80[AMR][1000 genomes]
rs511857	0.90[AMR][1000 genomes]
rs512832	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs513590	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs518089	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs519043	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs519256	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs519310	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs520075	0.90[AMR][1000 genomes]
rs521781	0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs524689	0.95[EUR][1000 genomes]
rs526640	0.95[EUR][1000 genomes]
rs529734	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs531737	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs535234	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs537098	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs539085	0.90[AMR][1000 genomes]
rs540592	0.90[AMR][1000 genomes]
rs542683	0.90[AMR][1000 genomes]
rs545803	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs547469	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs547540	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs549519	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs550275	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs552887	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs557895	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs558013	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs558099	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs558146	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs558403	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs561676	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs563687	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs564570	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs567460	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs574497	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs576050	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs587953	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs591856	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs592308	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs598767	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs599254	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs600215	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs600559	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs608998	0.90[AMR][1000 genomes]
rs610165	0.90[AMR][1000 genomes]
rs611013	0.80[AMR][1000 genomes]
rs614365	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs615237	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs615701	0.90[AMR][1000 genomes]
rs621584	0.95[EUR][1000 genomes]
rs622512	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs625951	0.90[AMR][1000 genomes]
rs628312	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs630551	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs631452	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs635588	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs642957	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs643881	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs644312	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs651936	0.98[ASN][1000 genomes]
rs657792	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs660503	0.90[AMR][1000 genomes]
rs665148	0.95[EUR][1000 genomes]
rs666476	0.90[AMR][1000 genomes]
rs667889	0.86[EUR][1000 genomes]
rs668254	0.95[EUR][1000 genomes]
rs675815	0.90[AMR][1000 genomes]
rs678346	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs678880	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs679551	0.95[EUR][1000 genomes]
rs680053	0.95[EUR][1000 genomes]
rs680976	0.95[EUR][1000 genomes]
rs682357	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs682780	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7116544	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv3527777	chr14:32669175-32761850	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv3527778	chr14:32669175-32761850	Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv564184	chr14:32688214-32734691	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32701200-32713600	Weak transcription	Left Ventricle	heart

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