The 2.0 version of rSNPBase

Variant report

Variant rs34827546
Chromosome Location chr10:28618451-28618452
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:28596800-28618800 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr10:28614000-28619000 Enhancers Primary T helper naive cells fromperipheralblood blood
3 chr10:28614800-28620600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr10:28615000-28620000 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr10:28615200-28619200 Enhancers Primary T helper cells PMA-I stimulated --
6 chr10:28615200-28621000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr10:28616000-28619000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr10:28616000-28619600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr10:28616000-28621600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr10:28616200-28619200 Weak transcription Fetal Thymus thymus
11 chr10:28616200-28619800 Weak transcription Primary B cells from peripheral blood blood
12 chr10:28616400-28618800 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr10:28616400-28620800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr10:28616600-28618800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr10:28616800-28618600 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr10:28616800-28619000 Weak transcription Primary B cells from cord blood blood
17 chr10:28616800-28620600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr10:28616800-28623000 Weak transcription Fetal Muscle Leg muscle
19 chr10:28616800-28623800 Weak transcription NHLF lung
20 chr10:28617000-28618800 Weak transcription Primary monocytes fromperipheralblood blood
21 chr10:28617000-28618800 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr10:28617000-28618800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr10:28617000-28619000 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr10:28617000-28619400 Weak transcription Primary hematopoietic stem cells blood
25 chr10:28617000-28620600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr10:28617000-28621000 Enhancers Colon Smooth Muscle Colon
27 chr10:28617000-28621600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr10:28617000-28621600 Weak transcription Pancreas Pancrea
29 chr10:28617000-28622800 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr10:28617200-28621000 Weak transcription NH-A brain
31 chr10:28617400-28618600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr10:28617400-28618800 Weak transcription Primary T cells from cord blood blood
33 chr10:28617400-28621000 Weak transcription HMEC breast
34 chr10:28617600-28621000 Weak transcription Muscle Satellite Cultured Cells --
35 chr10:28617600-28621000 Weak transcription HSMM muscle
36 chr10:28617800-28618800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr10:28617800-28621000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr10:28617800-28622600 Weak transcription NHEK skin
39 chr10:28617800-28623000 Weak transcription Fetal Stomach stomach
40 chr10:28618000-28620200 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr10:28618200-28618600 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr10:28618200-28619800 Weak transcription Rectal Smooth Muscle rectum
43 chr10:28618200-28620600 Weak transcription Stomach Smooth Muscle stomach
44 chr10:28618200-28621000 Weak transcription HSMMtube muscle
45 chr10:28618200-28621200 Enhancers Primary T helper cells fromperipheralblood blood
46 chr10:28618400-28618800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015