The 2.0 version of rSNPBase

Variant report

Variant rs72805627
Chromosome Location chr10:28617084-28617085
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:28596800-28618800 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr10:28614000-28619000 Enhancers Primary T helper naive cells fromperipheralblood blood
3 chr10:28614600-28617800 Enhancers Fetal Stomach stomach
4 chr10:28614800-28620600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
5 chr10:28615000-28620000 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr10:28615200-28617200 Enhancers Primary T helper cells fromperipheralblood blood
7 chr10:28615200-28617400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr10:28615200-28619200 Enhancers Primary T helper cells PMA-I stimulated --
9 chr10:28615200-28621000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
10 chr10:28615400-28617400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr10:28615400-28617600 Enhancers Muscle Satellite Cultured Cells --
12 chr10:28615600-28617200 Enhancers NH-A brain
13 chr10:28615600-28617400 Enhancers Primary T cells from cord blood blood
14 chr10:28615600-28617400 Enhancers HMEC breast
15 chr10:28615800-28617400 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr10:28615800-28617600 Enhancers Fetal Heart heart
17 chr10:28616000-28617600 Enhancers HSMM muscle
18 chr10:28616000-28618200 Weak transcription Primary T cells fromperipheralblood blood
19 chr10:28616000-28619000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr10:28616000-28619600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr10:28616000-28621600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr10:28616200-28617800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr10:28616200-28619200 Weak transcription Fetal Thymus thymus
24 chr10:28616200-28619800 Weak transcription Primary B cells from peripheral blood blood
25 chr10:28616400-28617200 Enhancers Brain Hippocampus Middle brain
26 chr10:28616400-28617400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr10:28616400-28617400 Enhancers Stomach Smooth Muscle stomach
28 chr10:28616400-28618800 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr10:28616400-28620800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr10:28616600-28618800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr10:28616800-28617400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr10:28616800-28617800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr10:28616800-28618000 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr10:28616800-28618200 Enhancers Rectal Smooth Muscle rectum
35 chr10:28616800-28618600 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr10:28616800-28619000 Weak transcription Primary B cells from cord blood blood
37 chr10:28616800-28620600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr10:28616800-28623000 Weak transcription Fetal Muscle Leg muscle
39 chr10:28616800-28623800 Weak transcription NHLF lung
40 chr10:28617000-28617600 Enhancers HSMMtube muscle
41 chr10:28617000-28617800 Enhancers NHEK skin
42 chr10:28617000-28618800 Weak transcription Primary monocytes fromperipheralblood blood
43 chr10:28617000-28618800 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr10:28617000-28618800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr10:28617000-28619000 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr10:28617000-28619400 Weak transcription Primary hematopoietic stem cells blood
47 chr10:28617000-28620600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr10:28617000-28621000 Enhancers Colon Smooth Muscle Colon
49 chr10:28617000-28621600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr10:28617000-28621600 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015