Variant report

rSNPs within LD-proxies of this variant (count:21)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027263	chr4:149127120-149320135	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv537296	chr4:149127120-149320135	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv880245	chr4:149132756-149183374	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv1031815	chr4:149172485-149282928	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149171000-149183600	Weak transcription	Primary T helper cells fromperipheralblood	blood
2	chr4:149175600-149195000	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr4:149176400-149186400	Weak transcription	Fetal Intestine Small	intestine
4	chr4:149176400-149188400	Weak transcription	Right Atrium	heart
5	chr4:149177200-149184400	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr4:149177200-149194800	Weak transcription	Small Intestine	intestine
7	chr4:149177400-149184600	Weak transcription	HUVEC	blood vessel
8	chr4:149177400-149184800	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr4:149180000-149194600	Weak transcription	Left Ventricle	heart
10	chr4:149181200-149194800	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr4:149182200-149182800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr4:149182400-149182600	ZNF genes & repeats	Esophagus	oesophagus
13	chr4:149182400-149182600	Enhancers	Gastric	stomach
14	chr4:149182400-149182600	ZNF genes & repeats	Lung	lung
15	chr4:149182400-149182800	ZNF genes & repeats	Duodenum Mucosa	Duodenum
16	chr4:149182400-149182800	Enhancers	Placenta	Placenta
17	chr4:149182400-149182800	ZNF genes & repeats	Pancreas	Pancrea
18	chr4:149182400-149183000	Enhancers	Rectal Smooth Muscle	rectum
19	chr4:149182400-149183200	Weak transcription	Colon Smooth Muscle	Colon
20	chr4:149182400-149183600	Enhancers	Fetal Stomach	stomach
21	chr4:149182400-149184000	Enhancers	Fetal Kidney	kidney

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