Variant report

Variant	rs35253144
Chromosome Location	chrX:122787415-122787416
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	X:122784060-122789599..X:123096825-123103985	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000101972	Chromatin interaction

rs_ID	r²[population]
rs12342982	0.81[AFR][1000 genomes]
rs12344174	0.88[EUR][1000 genomes]
rs13284880	0.82[EUR][1000 genomes]
rs13286083	0.88[EUR][1000 genomes]
rs13295684	0.82[EUR][1000 genomes]
rs13297021	0.82[EUR][1000 genomes]
rs13299801	0.82[EUR][1000 genomes]
rs13300480	0.82[EUR][1000 genomes]
rs13301620	0.82[EUR][1000 genomes]
rs1412308	0.82[EUR][1000 genomes]
rs16929764	0.82[EUR][1000 genomes]
rs16929768	0.82[EUR][1000 genomes]
rs16929788	0.88[EUR][1000 genomes]
rs1831561	0.88[EUR][1000 genomes]
rs34040994	0.82[EUR][1000 genomes]
rs34297034	0.82[EUR][1000 genomes]
rs34660175	0.82[EUR][1000 genomes]
rs35313919	0.88[EUR][1000 genomes]
rs35685701	0.82[EUR][1000 genomes]
rs35696782	0.82[EUR][1000 genomes]
rs35858006	0.88[EUR][1000 genomes]
rs36050768	0.88[EUR][1000 genomes]
rs36080084	0.88[EUR][1000 genomes]
rs36196009	0.88[EUR][1000 genomes]
rs71507337	0.88[EUR][1000 genomes]
rs71507342	0.88[EUR][1000 genomes]

Chromatin state (count:78 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:122735200-122820400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chrX:122752800-122865600	Weak transcription	Small Intestine	intestine
3	chrX:122756600-122806000	Weak transcription	Fetal Stomach	stomach
4	chrX:122758200-122799200	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chrX:122758600-122800400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chrX:122760600-122794400	Weak transcription	Brain Hippocampus Middle	brain
7	chrX:122761000-122809200	Weak transcription	Thymus	Thymus
8	chrX:122762000-122799000	Weak transcription	HSMM	muscle
9	chrX:122762200-122828800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
10	chrX:122762800-122794800	Weak transcription	Fetal Muscle Leg	muscle
11	chrX:122763200-122819200	Weak transcription	Gastric	stomach
12	chrX:122765200-122798600	Weak transcription	NHEK	skin
13	chrX:122765200-122799000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
14	chrX:122765400-122788400	Weak transcription	GM12878-XiMat	blood
15	chrX:122765400-122798800	Weak transcription	HMEC	breast
16	chrX:122765400-122807200	Weak transcription	Primary B cells from cord blood	blood
17	chrX:122765600-122796600	Weak transcription	Primary T cells from cord blood	blood
18	chrX:122765600-122799000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chrX:122765600-122800000	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chrX:122765600-122800000	Weak transcription	Spleen	Spleen
21	chrX:122765600-122800200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chrX:122766400-122799200	Weak transcription	Left Ventricle	heart
23	chrX:122767000-122798600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
24	chrX:122767200-122789200	Weak transcription	Primary neutrophils fromperipheralblood	blood
25	chrX:122767200-122798800	Weak transcription	HUVEC	blood vessel
26	chrX:122767200-122804800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chrX:122767400-122796600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chrX:122767600-122794800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chrX:122768000-122796600	Weak transcription	Fetal Kidney	kidney
30	chrX:122768200-122793800	Weak transcription	Duodenum Mucosa	Duodenum
31	chrX:122771000-122799000	Weak transcription	Muscle Satellite Cultured Cells	--
32	chrX:122771000-122799200	Weak transcription	Ovary	ovary
33	chrX:122771200-122788200	Weak transcription	Fetal Thymus	thymus
34	chrX:122772600-122794000	Weak transcription	Primary T helper cells PMA-I stimulated	--
35	chrX:122772600-122795400	Weak transcription	Primary hematopoietic stem cells	blood
36	chrX:122772600-122796600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chrX:122772800-122796600	Weak transcription	Liver	Liver
38	chrX:122772800-122836200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chrX:122773000-122792400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
40	chrX:122773000-122798800	Weak transcription	Primary T helper cells fromperipheralblood	blood
41	chrX:122773800-122793800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
42	chrX:122773800-122796600	Weak transcription	Adipose Nuclei	Adipose
43	chrX:122775200-122793800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chrX:122775800-122793800	Weak transcription	Monocytes-CD14+_RO01746	blood
45	chrX:122777200-122788600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
46	chrX:122778800-122794000	Weak transcription	Primary monocytes fromperipheralblood	blood
47	chrX:122779000-122799000	Weak transcription	Placenta	Placenta
48	chrX:122779200-122793800	Weak transcription	Dnd41	blood
49	chrX:122779400-122799000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chrX:122780800-122796600	Weak transcription	K562	blood

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