The 2.0 version of rSNPBase

Variant report

Variant rs35310790
Chromosome Location chr19:41758047-41758048
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41730200-41762600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:41732600-41768800 Weak transcription Small Intestine intestine
3 chr19:41733200-41767200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr19:41733200-41767200 Strong transcription Muscle Satellite Cultured Cells --
5 chr19:41736000-41767200 Strong transcription Osteobl bone
6 chr19:41736000-41767400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr19:41736400-41767800 Strong transcription Placenta Amnion Placenta Amnion
8 chr19:41736600-41766200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr19:41736600-41766600 Strong transcription Fetal Stomach stomach
10 chr19:41736600-41767000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr19:41736600-41767200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr19:41736600-41767400 Strong transcription HSMM muscle
13 chr19:41736600-41767800 Weak transcription Brain Angular Gyrus brain
14 chr19:41736800-41758200 Strong transcription Fetal Muscle Leg muscle
15 chr19:41736800-41762400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr19:41737200-41766000 Strong transcription Stomach Smooth Muscle stomach
17 chr19:41737400-41766600 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr19:41738000-41761000 Strong transcription Colon Smooth Muscle Colon
19 chr19:41738800-41767400 Weak transcription Fetal Brain Male brain
20 chr19:41739400-41758200 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr19:41739400-41767400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr19:41739800-41766200 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr19:41742600-41767600 Strong transcription A549 lung
24 chr19:41743600-41758400 Strong transcription Fetal Muscle Trunk muscle
25 chr19:41743800-41761200 Strong transcription H1 Cell Line embryonic stem cell
26 chr19:41745200-41765000 Weak transcription Fetal Brain Female brain
27 chr19:41745600-41760600 Strong transcription HUES48 Cell Line embryonic stem cell
28 chr19:41745800-41758200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr19:41745800-41762200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr19:41745800-41767200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr19:41746800-41758200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr19:41749600-41758200 Weak transcription Right Ventricle heart
33 chr19:41749600-41758400 Weak transcription Spleen Spleen
34 chr19:41753400-41767000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr19:41753800-41759800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr19:41753800-41767400 Strong transcription NHDF-Ad bronchial
37 chr19:41754200-41758200 Strong transcription Placenta Placenta
38 chr19:41754200-41766000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr19:41754200-41766000 Strong transcription NHEK skin
40 chr19:41754200-41767200 Strong transcription HUES6 Cell Line embryonic stem cell
41 chr19:41754600-41767200 Weak transcription Brain Germinal Matrix brain
42 chr19:41754800-41760200 Strong transcription Fetal Intestine Small intestine
43 chr19:41755000-41758200 Weak transcription H9 Cell Line embryonic stem cell
44 chr19:41755000-41758200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr19:41755000-41758200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr19:41755000-41758200 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr19:41755000-41758400 Weak transcription Left Ventricle heart
48 chr19:41755000-41758600 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr19:41755000-41759400 Weak transcription Esophagus oesophagus
50 chr19:41755000-41762400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015