Variant report
| Variant | rs35482926 |
|---|---|
| Chromosome Location | chr4:100911086-100911087 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000245322 | Chromatin interaction |
| ENSG00000164032 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:9)
| rs_ID | r2[population] |
|---|---|
| rs13119910 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs13141071 | 1.00[AFR][1000 genomes] |
| rs35674039 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs35856091 | 1.00[AFR][1000 genomes] |
| rs36072554 | 0.83[EUR][1000 genomes] |
| rs56121018 | 1.00[AFR][1000 genomes] |
| rs56271274 | 1.00[AFR][1000 genomes] |
| rs71614619 | 1.00[AFR][1000 genomes] |
| rs919131 | 1.00[AFR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv967777 | chr4:100909755-100913192 | Enhancers | TF binding regionChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
