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Variant report
Variant
rs35610792
Chromosome Location
chrY:20065054-20065055
allele
-/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:1)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
(count:1 , 50 per page) page:
1
No.
lncRNA name
Chromosome Location
lncRNA alias
1
lnc-CDY2A-3
chrY:20063942-20065380
NONHSAT139555
No data
No data
No data
Extended variants information (count: 5 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
esv3323847
chrY:19761870-20363015
ZNF genes & repeats
TF binding regionlncRNA
31 gene(s)
inside rSNPs
n/a
2
nsv469874
chrY:19958972-20208953
ZNF genes & repeats
TF binding regionlncRNA
9 gene(s)
inside rSNPs
n/a
3
nsv482576
chrY:19958972-20208953
ZNF genes & repeats
TF binding regionlncRNA
9 gene(s)
inside rSNPs
n/a
4
esv3443758
chrY:20029498-20340872
ZNF genes & repeats
TF binding regionlncRNA
15 gene(s)
inside rSNPs
n/a
5
nsv869477
chrY:20063342-20961810
Enhancers Weak transcription Active TSS ZNF genes & repeats
TF binding regionCpG islandlncRNA
46 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
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