Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:75589308..75591294-chr5:75591949..75593986,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs13174383	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2270927	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2358712	0.83[AMR][1000 genomes]
rs246813	0.81[AMR][1000 genomes]
rs31243	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs31244	0.83[AMR][1000 genomes]
rs35966882	0.89[AMR][1000 genomes]
rs4496693	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4546360	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4566770	0.84[AMR][1000 genomes]
rs4566771	0.87[AMR][1000 genomes]
rs4613682	0.82[AMR][1000 genomes]
rs6453213	0.89[AMR][1000 genomes]
rs6453214	0.83[AMR][1000 genomes]
rs67560206	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs67771044	0.89[AMR][1000 genomes]
rs6874435	0.82[AMR][1000 genomes]
rs6875731	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6876070	0.83[AMR][1000 genomes]
rs6891108	0.83[AMR][1000 genomes]
rs7730153	0.89[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027368	chr5:74759999-75663712	Active TSS Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv870415	chr5:75526088-75738412	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:75585000-75593400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr5:75585000-75596000	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr5:75586200-75592400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr5:75586400-75591400	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr5:75587400-75592200	Weak transcription	Liver	Liver
6	chr5:75587800-75591800	Enhancers	Primary hematopoietic stem cells	blood
7	chr5:75588200-75599800	Weak transcription	Pancreas	Pancrea
8	chr5:75588400-75599800	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr5:75589000-75593400	Weak transcription	Fetal Intestine Small	intestine
10	chr5:75589200-75590800	Enhancers	GM12878-XiMat	blood
11	chr5:75589600-75590600	Weak transcription	Primary B cells from cord blood	blood
12	chr5:75589600-75591400	Enhancers	Fetal Thymus	thymus
13	chr5:75589600-75593200	Weak transcription	Duodenum Mucosa	Duodenum
14	chr5:75589800-75590600	Enhancers	Monocytes-CD14+_RO01746	blood
15	chr5:75589800-75591200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
16	chr5:75590000-75593600	Weak transcription	Stomach Mucosa	stomach

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