The 2.0 version of rSNPBase

Variant report

Variant rs35773347
Chromosome Location chr1:223063652-223063653
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223029800-223066800 Weak transcription Primary B cells from cord blood blood
2 chr1:223046600-223064200 Weak transcription Primary hematopoietic stem cells blood
3 chr1:223051600-223070600 Weak transcription Small Intestine intestine
4 chr1:223051800-223066000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:223051800-223070000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr1:223051800-223070000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:223052800-223065600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:223052800-223070200 Weak transcription Colon Smooth Muscle Colon
9 chr1:223054400-223066800 Weak transcription Fetal Intestine Small intestine
10 chr1:223055800-223082800 Weak transcription Fetal Heart heart
11 chr1:223056800-223066600 Weak transcription Fetal Intestine Large intestine
12 chr1:223057800-223068000 Weak transcription Placenta Placenta
13 chr1:223058200-223065400 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:223059800-223064000 Enhancers Hela-S3 cervix
15 chr1:223060200-223071200 Weak transcription Ovary ovary
16 chr1:223060400-223064800 Weak transcription HepG2 liver
17 chr1:223060400-223070000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:223060600-223070000 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr1:223060800-223070200 Weak transcription Fetal Lung lung
20 chr1:223062600-223066000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:223062800-223064000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr1:223062800-223070200 Weak transcription Adipose Nuclei Adipose
23 chr1:223063000-223066800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:223063200-223065400 Weak transcription NHEK skin
25 chr1:223063200-223070400 Weak transcription Primary T cells from cord blood blood
26 chr1:223063400-223065000 Weak transcription Muscle Satellite Cultured Cells --
27 chr1:223063400-223066000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:223063600-223063800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:223063600-223064800 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015