The 2.0 version of rSNPBase

Variant report

Variant rs4298738
Chromosome Location chr1:223064450-223064451
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223029800-223066800 Weak transcription Primary B cells from cord blood blood
2 chr1:223051600-223070600 Weak transcription Small Intestine intestine
3 chr1:223051800-223066000 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:223051800-223070000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr1:223051800-223070000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr1:223052800-223065600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:223052800-223070200 Weak transcription Colon Smooth Muscle Colon
8 chr1:223054400-223066800 Weak transcription Fetal Intestine Small intestine
9 chr1:223055800-223082800 Weak transcription Fetal Heart heart
10 chr1:223056800-223066600 Weak transcription Fetal Intestine Large intestine
11 chr1:223057800-223068000 Weak transcription Placenta Placenta
12 chr1:223058200-223065400 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr1:223060200-223071200 Weak transcription Ovary ovary
14 chr1:223060400-223064800 Weak transcription HepG2 liver
15 chr1:223060400-223070000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:223060600-223070000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr1:223060800-223070200 Weak transcription Fetal Lung lung
18 chr1:223062600-223066000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:223062800-223070200 Weak transcription Adipose Nuclei Adipose
20 chr1:223063000-223066800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:223063200-223065400 Weak transcription NHEK skin
22 chr1:223063200-223070400 Weak transcription Primary T cells from cord blood blood
23 chr1:223063400-223065000 Weak transcription Muscle Satellite Cultured Cells --
24 chr1:223063400-223066000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:223063600-223064800 Weak transcription HUVEC blood vessel
26 chr1:223063800-223068400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:223064400-223066600 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015