Variant report
| Variant | rs35776136 |
|---|---|
| Chromosome Location | chr6:54713700-54713701 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:54709000-54714200 | Active TSS | Duodenum Mucosa | Duodenum |
| 2 | chr6:54710600-54713800 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr6:54710800-54714400 | Active TSS | Colonic Mucosa | Colon |
| 4 | chr6:54712200-54714400 | Flanking Active TSS | Hela-S3 | cervix |
| 5 | chr6:54712600-54725000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 6 | chr6:54712800-54714400 | Enhancers | Placenta Amnion | Placenta Amnion |
| 7 | chr6:54712800-54716800 | Weak transcription | Fetal Heart | heart |
| 8 | chr6:54713000-54714600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 9 | chr6:54713200-54714000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 10 | chr6:54713200-54714000 | Weak transcription | Esophagus | oesophagus |
| 11 | chr6:54713200-54714400 | Weak transcription | Fetal Intestine Large | intestine |
| 12 | chr6:54713200-54715000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 13 | chr6:54713200-54718200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 14 | chr6:54713200-54720800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 15 | chr6:54713200-54721000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 16 | chr6:54713200-54725600 | Weak transcription | Gastric | stomach |
| 17 | chr6:54713400-54713800 | Weak transcription | Placenta | Placenta |
| 18 | chr6:54713400-54713800 | Weak transcription | Pancreas | Pancrea |
| 19 | chr6:54713400-54713800 | Flanking Active TSS | NHEK | skin |
| 20 | chr6:54713400-54714000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 21 | chr6:54713400-54714200 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 22 | chr6:54713400-54714200 | Enhancers | Fetal Intestine Small | intestine |
| 23 | chr6:54713400-54720800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 24 | chr6:54713400-54720800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 25 | chr6:54713400-54726400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 26 | chr6:54713600-54714200 | Flanking Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 27 | chr6:54713600-54714200 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 28 | chr6:54713600-54714600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 29 | chr6:54713600-54714600 | Flanking Active TSS | HMEC | breast |
