The 2.0 version of rSNPBase

Variant report

Variant rs35815169
Chromosome Location chr17:17306984-17306985
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17299800-17310400 Enhancers Primary hematopoietic stem cells blood
2 chr17:17301400-17307000 Enhancers Primary T cells fromperipheralblood blood
3 chr17:17301400-17307000 Enhancers Primary T helper cells PMA-I stimulated --
4 chr17:17302000-17318800 Weak transcription Right Atrium heart
5 chr17:17302200-17307400 Weak transcription Brain Anterior Caudate brain
6 chr17:17303200-17307800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr17:17304400-17307000 Enhancers Osteobl bone
8 chr17:17304400-17307600 Enhancers Muscle Satellite Cultured Cells --
9 chr17:17304600-17307600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr17:17304600-17307800 Enhancers HSMM muscle
11 chr17:17304800-17307800 Enhancers HSMMtube muscle
12 chr17:17305000-17307000 Enhancers Brain Germinal Matrix brain
13 chr17:17305000-17308000 Enhancers HUVEC blood vessel
14 chr17:17305000-17311400 Weak transcription Pancreas Pancrea
15 chr17:17305200-17307400 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr17:17305200-17309600 Weak transcription Esophagus oesophagus
17 chr17:17305600-17307600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr17:17305800-17307000 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr17:17305800-17308000 Enhancers Primary mononuclear cells fromperipheralblood Blood
20 chr17:17305800-17309200 Enhancers Primary B cells from peripheral blood blood
21 chr17:17306000-17307400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr17:17306000-17307400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
23 chr17:17306000-17308400 Enhancers Primary B cells from cord blood blood
24 chr17:17306000-17310000 Enhancers Fetal Muscle Leg muscle
25 chr17:17306200-17307000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
26 chr17:17306200-17307800 Bivalent Enhancer Fetal Muscle Trunk muscle
27 chr17:17306200-17309600 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr17:17306400-17307800 Enhancers Rectal Mucosa Donor 29 rectum
29 chr17:17306400-17308000 Enhancers Cortex derived primary cultured neurospheres brain
30 chr17:17306400-17308400 Enhancers Fetal Brain Female brain
31 chr17:17306400-17308800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr17:17306400-17309600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr17:17306600-17307000 Bivalent Enhancer Fetal Intestine Small intestine
34 chr17:17306600-17307200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr17:17306600-17307200 Flanking Active TSS Dnd41 blood
36 chr17:17306600-17307600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr17:17306600-17307600 Bivalent Enhancer Fetal Stomach stomach
38 chr17:17306600-17307800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr17:17306600-17307800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr17:17306600-17307800 Enhancers Fetal Lung lung
41 chr17:17306600-17308000 Enhancers Fetal Brain Male brain
42 chr17:17306600-17308200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
43 chr17:17306600-17308400 Enhancers Primary neutrophils fromperipheralblood blood
44 chr17:17306600-17309200 Weak transcription HepG2 liver
45 chr17:17306600-17315400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr17:17306800-17307000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
47 chr17:17306800-17307200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
48 chr17:17306800-17307200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
49 chr17:17306800-17307200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr17:17306800-17307600 Enhancers H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015