Variant report

Variant rs35816397
Chromosome Location chr3:237899-237900
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:236400-238200 Weak transcription Spleen Spleen
2 chr3:236800-238000 Active TSS Fetal Brain Female brain
3 chr3:237000-240400 Active TSS Ovary ovary
4 chr3:237200-240000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
5 chr3:237200-240200 Active TSS Brain Anterior Caudate brain
6 chr3:237200-241000 Active TSS Brain Angular Gyrus brain
7 chr3:237200-241000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
8 chr3:237200-241000 Active TSS Fetal Brain Male brain
9 chr3:237400-241200 Active TSS Brain Inferior Temporal Lobe brain
10 chr3:237600-240000 Bivalent/Poised TSS Brain Germinal Matrix brain
11 chr3:237600-240200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
12 chr3:237600-241200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
13 chr3:237800-238000 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
14 chr3:237800-238000 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr3:237800-238000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
16 chr3:237800-238000 Active TSS Brain Substantia Nigra brain
17 chr3:237800-238200 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
18 chr3:237800-238200 Bivalent Enhancer Primary B cells from cord blood blood
19 chr3:237800-238200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
20 chr3:237800-238200 Bivalent Enhancer NHEK skin
21 chr3:237800-238400 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
22 chr3:237800-238600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
23 chr3:237800-238600 Bivalent/Poised TSS Fetal Kidney kidney
24 chr3:237800-240200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr3:237800-240200 Bivalent/Poised TSS Duodenum Mucosa Duodenum
26 chr3:237800-240400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
27 chr3:237800-240400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
28 chr3:237800-240400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
29 chr3:237800-240400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
30 chr3:237800-240400 Flanking Active TSS Adipose Nuclei Adipose
31 chr3:237800-240400 Active TSS Pancreatic Islets Pancreatic Islet
32 chr3:237800-240400 Active TSS Rectal Mucosa Donor 29 rectum
33 chr3:237800-240400 Active TSS Right Atrium heart
34 chr3:237800-240600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell

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