Variant report

Variant rs36000194
Chromosome Location chr5:180221222-180221223
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180212400-180225400 Strong transcription Thymus Thymus
2 chr5:180212800-180228600 Weak transcription Fetal Brain Male brain
3 chr5:180214400-180222600 Weak transcription Right Atrium heart
4 chr5:180214400-180222800 Weak transcription Stomach Mucosa stomach
5 chr5:180214400-180223000 Strong transcription Primary neutrophils fromperipheralblood blood
6 chr5:180214400-180224400 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr5:180214600-180223000 Strong transcription Primary monocytes fromperipheralblood blood
8 chr5:180214600-180223400 Strong transcription Fetal Thymus thymus
9 chr5:180214600-180224600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr5:180214600-180227000 Weak transcription Fetal Kidney kidney
11 chr5:180214800-180222000 Strong transcription Rectal Mucosa Donor 31 rectum
12 chr5:180214800-180226400 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr5:180215000-180223600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr5:180215200-180222400 Strong transcription Stomach Smooth Muscle stomach
15 chr5:180215200-180222800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr5:180215200-180223000 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr5:180215200-180224000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr5:180215400-180224600 Weak transcription Fetal Heart heart
19 chr5:180215400-180227800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:180215600-180222000 Strong transcription NHLF lung
21 chr5:180215600-180226400 Strong transcription Fetal Stomach stomach
22 chr5:180216200-180224000 Weak transcription NHDF-Ad bronchial
23 chr5:180216400-180224200 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr5:180216800-180223600 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr5:180217200-180224000 Strong transcription Fetal Muscle Leg muscle
26 chr5:180217600-180223200 Strong transcription NHEK skin
27 chr5:180217600-180223400 Genic enhancers Primary T helper cells fromperipheralblood blood
28 chr5:180218200-180222800 Weak transcription Small Intestine intestine
29 chr5:180218600-180224000 Weak transcription K562 blood
30 chr5:180218800-180222800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr5:180219000-180222400 Weak transcription Hela-S3 cervix
32 chr5:180219000-180228600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr5:180219200-180221600 Weak transcription HSMM muscle
34 chr5:180219200-180222800 Strong transcription Placenta Placenta
35 chr5:180219400-180221800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr5:180219400-180222800 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr5:180219400-180224600 Weak transcription HSMMtube muscle
38 chr5:180219600-180221600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr5:180219600-180222400 Weak transcription Brain Anterior Caudate brain
40 chr5:180219600-180223600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr5:180219600-180224800 Weak transcription Brain Angular Gyrus brain
42 chr5:180219600-180224800 Weak transcription A549 lung
43 chr5:180219600-180228600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr5:180219800-180222800 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr5:180219800-180223800 Weak transcription Colon Smooth Muscle Colon
46 chr5:180219800-180224200 Genic enhancers Primary T helper naive cells fromperipheralblood blood
47 chr5:180220000-180221600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr5:180220000-180221800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr5:180220000-180221800 Weak transcription GM12878-XiMat blood
50 chr5:180220000-180222400 Weak transcription Pancreatic Islets Pancreatic Islet

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