Variant report

Variant	rs367095
Chromosome Location	chr14:77682021-77682022
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1504522	0.96[AMR][1000 genomes]
rs17750140	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2021536	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2287380	1.00[AFR][1000 genomes]
rs2540893	0.89[AMR][1000 genomes]
rs2540894	0.89[AMR][1000 genomes]
rs2540895	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2540901	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2655976	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34970502	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs404418	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs419630	1.00[AFR][1000 genomes]
rs419869	1.00[AFR][1000 genomes]
rs71413450	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs750932	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs8010477	1.00[AFR][1000 genomes]
rs905735	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431017	chr14:76938089-77854647	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	107 gene(s)	inside rSNPs	diseases
2	nsv832834	chr14:77554987-77724357	Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs367095	TMEM63C	cis	Whole Blood	GTEx

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77654200-77709400	Weak transcription	Esophagus	oesophagus
2	chr14:77671000-77685200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr14:77671000-77686200	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr14:77673600-77683400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:77674600-77685400	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr14:77674800-77686400	Weak transcription	Brain Substantia Nigra	brain
7	chr14:77679400-77686200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr14:77679600-77686000	Weak transcription	Brain Anterior Caudate	brain
9	chr14:77680000-77686000	Weak transcription	Spleen	Spleen
10	chr14:77680000-77686600	Weak transcription	Brain Angular Gyrus	brain
11	chr14:77680200-77685000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr14:77680200-77685600	Weak transcription	Fetal Brain Female	brain
13	chr14:77680200-77688000	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr14:77681600-77683000	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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