Variant report

Variant rs3731660
Chromosome Location chr2:99439792-99439793
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99418000-99442200 Weak transcription Stomach Mucosa stomach
2 chr2:99427400-99442000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr2:99435600-99444600 Weak transcription Hela-S3 cervix
4 chr2:99438000-99440000 Weak transcription HepG2 liver
5 chr2:99438400-99439800 Bivalent Enhancer Fetal Brain Male brain
6 chr2:99438400-99440200 Flanking Active TSS Right Ventricle heart
7 chr2:99438600-99440000 Active TSS Brain Hippocampus Middle brain
8 chr2:99438800-99439800 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr2:99438800-99439800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
10 chr2:99438800-99439800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
11 chr2:99438800-99439800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
12 chr2:99438800-99439800 Active TSS Primary mononuclear cells fromperipheralblood Blood
13 chr2:99438800-99439800 Active TSS Brain Cingulate Gyrus brain
14 chr2:99438800-99439800 Active TSS Right Atrium heart
15 chr2:99438800-99440000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
16 chr2:99438800-99440000 Active TSS Breast Myoepithelial Primary Cells Breast
17 chr2:99438800-99440000 Bivalent/Poised TSS Fetal Brain Female brain
18 chr2:99438800-99440600 Enhancers Spleen Spleen
19 chr2:99438800-99448600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr2:99439000-99439800 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
21 chr2:99439000-99439800 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr2:99439000-99439800 Active TSS Primary neutrophils fromperipheralblood blood
23 chr2:99439000-99439800 Active TSS Primary T helper naive cells fromperipheralblood blood
24 chr2:99439000-99439800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
25 chr2:99439000-99439800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
26 chr2:99439000-99439800 Active TSS Brain Anterior Caudate brain
27 chr2:99439000-99439800 Active TSS Brain Substantia Nigra brain
28 chr2:99439000-99439800 Active TSS Pancreatic Islets Pancreatic Islet
29 chr2:99439000-99439800 Active TSS Ovary ovary
30 chr2:99439000-99439800 Flanking Bivalent TSS/Enh Thymus Thymus
31 chr2:99439000-99439800 Bivalent/Poised TSS HSMM muscle
32 chr2:99439000-99440000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
33 chr2:99439000-99440000 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
34 chr2:99439000-99440000 Bivalent/Poised TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr2:99439000-99440000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:99439000-99440000 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
37 chr2:99439000-99440000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
38 chr2:99439000-99440000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
39 chr2:99439000-99440000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr2:99439000-99440000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr2:99439000-99440000 Active TSS Rectal Smooth Muscle rectum
42 chr2:99439000-99440200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
43 chr2:99439000-99440200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
44 chr2:99439000-99440400 Active TSS Duodenum Smooth Muscle Duodenum
45 chr2:99439200-99439800 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr2:99439200-99439800 Active TSS Primary T cells from cord blood blood
47 chr2:99439200-99439800 Active TSS Primary T helper naive cells from peripheral blood blood
48 chr2:99439200-99439800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
49 chr2:99439200-99439800 Flanking Active TSS Colonic Mucosa Colon
50 chr2:99439200-99439800 Bivalent/Poised TSS Colon Smooth Muscle Colon

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